Pairwise Alignments

Query, 259 a.a., N-acetylmuramoyl-L-alanine amidase from Agrobacterium fabrum C58

Subject, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 2e-39
 Identities = 98/238 (41%), Positives = 128/238 (53%), Gaps = 17/238 (7%)

Query: 19  PSPNHGERLGVAGPDIILLHYTGMTTADGALSWLRNPESQVSSHYFVFED-GRVIQLVPE 77
           PS N   R+       ++LHYT   + + +L+ L + E  VSSHY + +    V QLV E
Sbjct: 31  PSANQDNRI-----QFVVLHYTN-ASLERSLALLTHGE--VSSHYLIGDGPATVYQLVDE 82

Query: 78  SRRAWHAGKSSWAGDEDINSRSIGIEIANQGH---PGGLPEFP--EAQVAAVIELCRDCG 132
           +RRAWHAG+S W G   +NS SIGIEI N G    P G    P  EAQV A+I L +D  
Sbjct: 83  NRRAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNGRVWHPYSEAQVQALIALLKDIV 142

Query: 133 RRWSIAPERVLAHSDVAPIRKVDPGEKFPWDILSQHGVGHWVEP-APIRGGRFFQRGDHG 191
           +R +I P  ++ HSD+AP+RK+DPG  FPW  L+  G+G W +  A  R   +F    + 
Sbjct: 143 KRNNIEPRHIIGHSDIAPLRKLDPGPLFPWKRLADAGLGIWPDANAVARQQAYF--SVNP 200

Query: 192 QPVEALQSMLSIYGYGAEITGAYCEKTEGAVAAFQRHFRPALVDGIADFSTIDTLHRL 249
             V   Q  L+ +GY  E TG     T   VAAFQ  FRP   DG+ D  T   L  L
Sbjct: 201 PSVGWYQQELARFGYQIEQTGVLDVATRHVVAAFQMRFRPQRFDGMPDAQTAAMLQVL 258