Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 496 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas putida KT2440

 Score =  265 bits (678), Expect = 2e-75
 Identities = 176/475 (37%), Positives = 236/475 (49%), Gaps = 23/475 (4%)

Query: 30  ITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVV-----SGHAVEADVPVLVVT 84
           +T DSR   PG LF+AV G K DG  ++ DA+A+GA AV      +      DVP++ V 
Sbjct: 22  LTLDSRSVRPGDLFLAVPGAKVDGREHIADALARGAAAVAYEEQGANVLPLTDVPLIPVK 81

Query: 85  DPRLYLSLAASRFYGKQPD--TMVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIA 142
                LS  A RFYG+      +V VTGT GKTSV   V Q     G     IGT G   
Sbjct: 82  GLIAQLSDIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLVAQALDLLGQRCGLIGTLGTGF 141

Query: 143 PGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTNLG 202
            G    G LTTPDP+ + + L +L   G    AME SSH L+Q R+  +    A  TNL 
Sbjct: 142 YGELQSGRLTTPDPIAVQSTLNDLKKGGARAVAMEVSSHALEQGRVAALEFDIAVMTNLS 201

Query: 203 RDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAIGAAREAGLEVRTVGRN 262
           RDH+DYH ++E Y AAK +LF          V   DD     A   AR   ++       
Sbjct: 202 RDHLDYHGSMEAYEAAKAKLF-AWPSLRCQVVNLDDDFGRRLAADFARRPSVDHIETRLL 260

Query: 263 GQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIP---------LAGDFQVANALVAAGLAMS 313
              L       F  + +     DGV   +            L G F ++N L A    ++
Sbjct: 261 SYSLESPEASLFCREAVFS--DDGVRATLVTAQGERILRSQLLGRFNLSNMLAAVATLLA 318

Query: 314 TGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVRPFTSGRI 373
                   LK   +L G  GR++ +G      L  VDYAH PDALE VL ++RP   G++
Sbjct: 319 LDYALDEILKVTPQLQGPVGRMQRLGGGDK-PLVVVDYAHTPDALEKVLEALRPHAHGKL 377

Query: 374 ITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAAAGALE--- 430
           + +FGCGGDRD+GKRP+M EVA RL+D V+VTDDNPR+ED + I  ++        +   
Sbjct: 378 LCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPSRIFDDIRPGFTRPDDVEF 437

Query: 431 IGDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRSALAELE 485
           +  R EAI H ++  +  D +++AGKGHE+ Q +      FSD  +   ALA  E
Sbjct: 438 VAGRGEAIAHLIATAAANDVIVLAGKGHEDYQEINGERHDFSDLTEAEKALAAWE 492