Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 478 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Magnetospirillum magneticum AMB-1

 Score =  452 bits (1164), Expect = e-132
 Identities = 247/466 (53%), Positives = 302/466 (64%), Gaps = 4/466 (0%)

Query: 25  IEIGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSGHAVEADVP--VLV 82
           + I G+TADSR   PG LF A+ GTKADG A++  A+A GAVAV++      D+P  V++
Sbjct: 10  VTITGLTADSRAVRPGYLFAALPGTKADGRAFIPAALAAGAVAVLAPEGSRPDLPPEVVL 69

Query: 83  VTD--PRLYLSLAASRFYGKQPDTMVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGV 140
           VTD  PR   +L AS F+G QP  M AVTGT GKTS A F RQI A  GHAAA IGT G+
Sbjct: 70  VTDANPRRRFALMASAFHGAQPRVMTAVTGTNGKTSTAEFFRQIMARLGHAAAAIGTLGI 129

Query: 141 IAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTN 200
            APG ++ G LTTPDP  LHA LA LA  GVTHA MEASSHGLDQ RLDGV L AA FTN
Sbjct: 130 TAPGWDNQGGLTTPDPAGLHADLARLAEMGVTHACMEASSHGLDQHRLDGVRLMAAAFTN 189

Query: 201 LGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAIGAAREAGLEVRTVG 260
           L RDH+DYH  +  Y  AK+RLF  ++ +GA AVI AD   + +A+    + G+ V   G
Sbjct: 190 LTRDHLDYHADMNAYAEAKLRLFAEVLPEGATAVINADSDLAPRAVELCAKRGITVLGFG 249

Query: 261 RNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANALVAAGLAMSTGVPAAT 320
           R  + L L         Q +++   G    + +PLAG FQ  NAL A GLA++ G     
Sbjct: 250 RTARDLRLIEARPTAAGQELDLEIMGRAVTIRLPLAGRFQADNALAALGLALACGADPVA 309

Query: 321 ALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVRPFTSGRIITVFGCG 380
           AL+AL  L G  GRL+ V    NGA  YVDYAH PDALE VL ++RP  + R++ VFGCG
Sbjct: 310 ALEALGHLDGVPGRLQQVASRANGAPIYVDYAHTPDALETVLKALRPHAARRLVAVFGCG 369

Query: 381 GDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAAAGALEIGDRAEAIRH 440
           GDRD GKRP+MG +  RL+D +IVTDDNPRSED A IR+ V  A    +EI DR  AIR 
Sbjct: 370 GDRDAGKRPLMGAIGCRLADAMIVTDDNPRSEDPAAIRAAVRGACPAGIEIADRRGAIRA 429

Query: 441 AVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRSALAELEG 486
           AVS L  GD L++AGKGHE+GQIVG+  LPF D  + R A+   +G
Sbjct: 430 AVSGLQKGDVLVIAGKGHEQGQIVGASVLPFDDAAEARDAVRLADG 475