Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 471 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Paraburkholderia sabiae LMG 24235

 Score =  185 bits (470), Expect = 3e-51
 Identities = 161/490 (32%), Positives = 224/490 (45%), Gaps = 46/490 (9%)

Query: 4   LWTVADMIAITAGRPV-GNLPTGITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVAN 62
           ++T+ +  A+  G  V GN       +S DSRT   G+ F A+KGDR D HD+ +   A 
Sbjct: 3   MFTLREAAAVIPGATVAGNDSIAFDRVSTDSRTCGPGDLFVALKGDRFDAHDFLADVAAR 62

Query: 63  GASLLVVAEAKLPALGRLTVPMIVVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTK 122
             S   V  A+LP     T  + V  D   ALG LA   R+R S  ++AVTGS GKTT K
Sbjct: 63  NVS--AVLAARLPE-NFGTPALRVTGDTRVALGALANGWRKRFSMPVVAVTGSNGKTTVK 119

Query: 123 EMLRQ----ALAPSGRVHAAVASFNNHWGVPLTLARMPADTEFGVFEIGMNHSGEIRPLV 178
           EM+      A+  S R+ A   +FNN  G+PLTL R+    +  V E+GMNH GE   L 
Sbjct: 120 EMISSIFAAAVGESARL-ATAGNFNNDVGLPLTLFRLNDTHKLAVVELGMNHPGETSLLG 178

Query: 179 KMVRPHVAIITTIAPAHLGNFKNIEEIAAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAA 238
           K+  P VA++      H      +E +A   A +   ++  G  +   ++A         
Sbjct: 179 KISEPSVAVVNNAQREHQEFMATVEAVALEHASVIHVLKPEGVAVFPANDAY-------- 230

Query: 239 QEAGIEHILTFGQHAKADFRLADFESTT----TGSTIWAILNGETSELHINIP----GRH 290
             A I  +   G     DF L   E TT     GS     L+ +T E H+++     G H
Sbjct: 231 --ASIWRVAATGNRI-LDFALNTAERTTEAAVQGSLDGNQLSIDTPEGHVDVTLQVLGAH 287

Query: 291 IADNAMAVLGAVAVTGANLDRALEALGTLEAVKGRGQRHHLTING-GSFLLIDESYNANP 349
            A NA+A   A    G +LD     L    AVKGR Q     +       +ID++YNANP
Sbjct: 288 NAHNALAATAAALAAGVSLDAIKRGLEAFGAVKGRLQVKRAVLGAMAGATVIDDTYNANP 347

Query: 350 ASMRAAIAVLAETETQGHGRRVAVLGDMLEMGEFSAQLHEELAGPLLAAGIEHVWLAGEA 409
            SM AAI VLA + +     RV V+GDM E+G+   + H E+     A GI       +A
Sbjct: 348 DSMIAAIDVLAASPSP----RVLVMGDMGEVGDNGPEFHREVGAYAKAQGI-------DA 396

Query: 410 MAALRDALPDSVTVIWFPT--TAELTDFALQWVQPG----DALMVKSSLGLGFGKIVAAL 463
           + AL DA  D+            ++T    Q  Q G       +VK S  +   ++V A+
Sbjct: 397 LYALGDASRDACAAYGSEAHHCDDVTALVAQLQQAGYGAAATYLVKGSRFMKMERVVDAV 456

Query: 464 LDKYPAFPET 473
               PA P T
Sbjct: 457 TSPQPAAPGT 466