Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pectobacterium carotovorum WPP14

 Score =  219 bits (558), Expect = 2e-61
 Identities = 139/384 (36%), Positives = 205/384 (53%), Gaps = 17/384 (4%)

Query: 26  ITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGASLLVVAEAKLPALGRLTVPMI 85
           I  +S D+R +  G  F A+KG++ D HDY + AV  GA+ L+V++  L     +  P +
Sbjct: 24  IEDVSTDTRKLSSGCLFVALKGEKFDAHDYAADAVKGGAAALLVSKRLL-----VDEPQL 78

Query: 86  VVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTKEMLRQALAPSGRVHAAVASFNNH 145
           +V D   ALG+LA   R++++AR++A+TGS GKT+ KEM    L   G V     +FNN 
Sbjct: 79  LVSDTRVALGQLAAWVRQQSTARVVALTGSSGKTSVKEMTAAILRQCGSVLYTAGNFNND 138

Query: 146 WGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHVAIITTIAPAHLGNFKNIEEI 205
            GVPLTL R+ A+ +F V E+G NH GEI     +VRP  A++  +A AHL  F ++  +
Sbjct: 139 IGVPLTLLRLTAEHQFAVIELGANHIGEIAYTTDLVRPESALVNNLAAAHLEGFGSLAGV 198

Query: 206 AAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGIEHILTFGQHAKA--DFRLADFE 263
           A AK EIF G+   G  I+N D+  F   +        + +  F   A    DF  +D +
Sbjct: 199 AQAKGEIFAGLPVDGVAIVNADSNDFPHWQVMFNH---KTVWRFSPQAACDIDFFASDVD 255

Query: 264 STTTGSTIWAILNGETSELHINIPGRHIADNAMAVLGAVAVTGANLDRALEALGTLEAVK 323
               G+          +++ + +PGRH   NA+A        GA L+     L  L+AV 
Sbjct: 256 VLAQGTRFTLHTPFGKTQVLLPLPGRHNISNALAAAALAMSVGATLEAVKAGLSQLQAVP 315

Query: 324 GRGQRHHLTINGGSFLLIDESYNANPASMRAAIAVLAETETQGHGRRVAVLGDMLEMGEF 383
           GR     + ++ G  LL+D+SYNAN  SM AA  VLA+      G RV V+GDM E+G+ 
Sbjct: 316 GR--LFPIALSEGK-LLLDDSYNANVGSMTAAAQVLADMP----GYRVMVVGDMGELGDE 368

Query: 384 SAQLHEELAGPLLAAGIEHVWLAG 407
           + + H ++     AAGI+ V   G
Sbjct: 369 APECHRQVGEAARAAGIDRVLSVG 392