Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Alteromonas macleodii MIT1002

 Score =  208 bits (529), Expect = 4e-58
 Identities = 139/386 (36%), Positives = 202/386 (52%), Gaps = 20/386 (5%)

Query: 26  ITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGASLLVVAEAKLPALGRLTVPMI 85
           ++ +S D+RT++ G  + A+KG   +GHD+ S A   GAS ++ +E    +L     P+I
Sbjct: 26  VSAVSTDTRTLEDGAVYLALKGPNFNGHDFISTAEKAGASAVIASEDVATSL-----PVI 80

Query: 86  VVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTKEMLRQALAPSGRVHAAVASFNNH 145
           +VED   ALG L  A +   + + IA+TGS GKTT KEM    L   G V A   +FNN 
Sbjct: 81  MVEDTKEALGLLGAAVKAYVAPKTIAITGSSGKTTVKEMCAAILERRGNVLATNGNFNND 140

Query: 146 WGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHVAIITTIAPAHLGNFKNIEEI 205
            GVPLTL R+    E+ V E+G NH GEI     +V+P VA I   A +HL  F ++  +
Sbjct: 141 IGVPLTLLRLEPQHEYAVMELGANHIGEIAYTTNLVKPDVATIVNAAASHLEGFGSLLGV 200

Query: 206 AAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGIEHILTFGQHAK--ADFRLADFE 263
           A AK+EIF+G+   G  ++N D +QF +  +   +      LTF    K  ADFR  D  
Sbjct: 201 ARAKSEIFKGLGSDGVAVVNVD-SQFAEFWQGKLKQ--TKTLTFSPQQKNDADFRAEDIT 257

Query: 264 STTTGSTIWAIL--NGETSELHINIPGRHIADNAMAVLGAVAVTGANLDRALEALGTLEA 321
               G   + ++   G+ S + + IPG H   NA+         GA L+   + L  ++ 
Sbjct: 258 IGLDGCAAFHLVCPRGDMS-IQLTIPGVHNVGNALVAAALTLQVGATLENVRDGLLAMKQ 316

Query: 322 VKGRGQRHHLTINGGSFLLIDESYNANPASMRAAIAVLAETETQGHGRRVAVLGDMLEMG 381
           V GR     LT       L+D++YNAN AS+ AAI    +T +   G RV VLGDM E+G
Sbjct: 317 VSGRLNVKQLT---EQVRLLDDTYNANVASVNAAI----DTLSSFSGIRVLVLGDMKELG 369

Query: 382 EFSAQLHEELAGPLLAAGIEHVWLAG 407
           E +   HE++       GI +++  G
Sbjct: 370 EKARFYHEQVGEYAKQKGINYLYTMG 395