Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 504 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Paraburkholderia sabiae LMG 24235

 Score =  168 bits (425), Expect = 4e-46
 Identities = 152/505 (30%), Positives = 227/505 (44%), Gaps = 75/505 (14%)

Query: 12  VALFGLGGSGLVTARALVAGGAAVVAFDDN--PDSVAKAQAEGIATADLHTIDWSSFSSF 69
           V + GLG SGL  AR     G  +   D    P +++  +A GI            FS  
Sbjct: 14  VLVLGLGESGLAMARWCARHGCRLRIADTREVPPNLSALEAHGIEG----NFVGGPFSD- 68

Query: 70  VLAPGVPLTHPKPHWS---------VDLAKAAGVEVIGDIELFIRERRV-----HAPDCP 115
           VL  GV L    P  S         +  A+  G+ V G++E F +  +      +AP   
Sbjct: 69  VLLEGVELVAISPGLSPLAADLVPLIAAARERGIPVWGELEFFAQALKTLGENGYAPKV- 127

Query: 116 FIAITGTNGKSTTTALIAHILQSSGRDTQLGGNIGTAVL-----SLDPPKAQRFYVVECS 170
            IAITGTNGK+TTT+L   + + +G+   + GNI  A L     ++D       +V+E S
Sbjct: 128 -IAITGTNGKTTTTSLTGLLCERAGKKVAVAGNISPAALDKLTEAIDNTALPDVWVLELS 186

Query: 171 SYQIDLAPTINPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLI 230
           S+Q++ A T  P A ++LN+T DHLD HG +  YA  K ++   +   ++  DDS    +
Sbjct: 187 SFQLETAHTFEPDAAVILNITQDHLDWHGGLDAYAAAKGKIFGKNTVRVLNRDDSRVMAL 246

Query: 231 ADRIERAGVKVERISKRNVVSEGLYAEGSQILRAHGG----------------------- 267
           A   E++G ++        + +G Y     +LR +G                        
Sbjct: 247 APS-EQSGAQLVTFGINEPLRDGDYG----LLRDNGMIWLVQAQDRDATDEPVPTRRRKS 301

Query: 268 --------TSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAVGVSEEEIRAGLKSFPGLKH 319
                   T   L+  D ++ +RG HNA N+ AA A   A+G+    +  GL+ + G  H
Sbjct: 302 ESATPPDITLKRLMPADALR-IRGLHNATNSLAAFALARAIGLPGAPLLHGLREYRGEPH 360

Query: 320 RMQPVGRRGNVTFVNDSKATNADAAAPALSSF-DRIYWIAGGLPKAGGITSLSPLFPRIA 378
           R++ +     V +V+DSK TN  A   AL     R+  IAGG  K      L+    R  
Sbjct: 361 RVELIASIEGVDYVDDSKGTNVGATVAALDGLAQRVVLIAGGDGKGQEFDPLAEPVTRWC 420

Query: 379 KA-YLIGEAAAEFAATLGE-AVPYEISGTLDKAVQHAAADAEKDATAGNVVMLSPACASF 436
           +A  LIG  A +  A L    +      TL++A + A A A+     G+ V+LSPACASF
Sbjct: 421 RAVMLIGRDAPQIRAALEHTGIAMTEHATLEEATRAAGAVAQ----PGDAVLLSPACASF 476

Query: 437 DQYKNFEIRGDSF---VAQVAALEG 458
           D +K +  R   F   V  +AA  G
Sbjct: 477 DMFKGYAHRAAVFRSAVEDIAAERG 501