Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 438 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Pectobacterium carotovorum WPP14

 Score =  188 bits (477), Expect = 4e-52
 Identities = 151/462 (32%), Positives = 221/462 (47%), Gaps = 48/462 (10%)

Query: 4   VTSFRGKKVALFGLGGSGLVTARALVAGGAAVVAFDD--NPDSVAKAQAEGIATADLHTI 61
           +  ++GKKV + GLG +GL      +A G      D   +P  + K   +          
Sbjct: 1   MVDYQGKKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPEQVERHLGSLNE 60

Query: 62  DWSSFSSFVLA-PGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRVHAPDCPFIAIT 120
           DW   +  ++A PGV L  P    + D    AG+E++GDIELF RE +      P +AIT
Sbjct: 61  DWLMSADLIVASPGVALATPILCDAAD----AGIEIVGDIELFCREAQA-----PIVAIT 111

Query: 121 GTNGKSTTTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTI 180
           G+NGKST T L+  + +++G    +GGNIG   L L    AQ  YV+E SS+Q++   ++
Sbjct: 112 GSNGKSTVTTLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQ-LYVLELSSFQLETTSSL 170

Query: 181 NPTAGILLNLTPDHLDRHGT-MQHYADVKERLVAGSGTAIVGVDDSHSTLI--AD-RIER 236
           +  A  +LN+T DH +R+   +Q Y   K R+   +   +V  DD+ +  +  AD R   
Sbjct: 171 HAAAATILNVTEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPVRGADARCRS 230

Query: 237 AGVKVERISKRNVVSEGLYAEGSQILRAHGGTSSLLVDLDGIQTLR-----GSHNAQNAA 291
            GV V                G   L    G + L VD + +   R     G HN  NA 
Sbjct: 231 FGVDV----------------GDYHLNRQQGETWLRVDGERVLNTREIKLVGQHNYTNAL 274

Query: 292 AAIAACLAVGVSEEEIRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSF 351
           AA+A   AV +        L SF GL HR Q    R  V ++NDSKATN  +   ALS  
Sbjct: 275 AALALADAVKIPRSSALTALTSFTGLPHRFQMAFERNGVRWINDSKATNVGSTEAALSGL 334

Query: 352 ---DRIYWIAGGLPKAGGITSLSP-LFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLD 407
                ++ + GG  K+   + L P L       Y  G+   + AA   E    E + T++
Sbjct: 335 AVEGTLHLLLGGDGKSADFSPLVPYLQGEHIHVYCFGQDGQQLAALRPEIA--EQTETME 392

Query: 408 KAVQHAAADAEKDATAGNVVMLSPACASFDQYKNFEIRGDSF 449
           +A+   A    +    G++V+LSPACAS DQ+++FE RGD F
Sbjct: 393 QAMCIIA----ERVKPGDMVLLSPACASLDQFRSFEQRGDEF 430