Pairwise Alignments

Query, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 25/244 (10%)

Query: 35  IACLVTLIVIVMCTGGLTLLAQFGLV----TDLFNGIMLSV------TLGGAVAFTVTLL 84
           ++C  +   + + + GL LL   G +    + L  GI L+V       +    + +  L 
Sbjct: 133 VSCYSSYRNMTLVSMGLVLLPSTGWLLLQPSTLQQGIALAVLVFAWFVVSATQSLSSALT 192

Query: 85  VCWLNAREVQILVQSHERFLHLSHTDALTGLSNRLGLY-------AACAELGSDYCVAFL 137
             W    E+Q   ++H   +  S TD LTGL+NR   +         C + G+   V  L
Sbjct: 193 TAWRLKHEMQ---RAHRLAMVASCTDELTGLNNRRAFFDNASAQHVRCRDAGTFMAVLML 249

Query: 138 DIDHFKAVNDGYSHLVGDLVIASVARRIKEHFDPPAHVARLGGEEF-VVVQETSPLAFLQ 196
           D+DHFK +ND + H  GD V+  +   I           RLGGEEF +++  T P   ++
Sbjct: 250 DVDHFKQINDTFGHAAGDQVLQRIGAAISASLRDNDIAGRLGGEEFAILLPNTPPDTAIE 309

Query: 197 MCERVRAAIETTPVAYQDLRITVTISIGVAF-RGDAEIFDKVMHNADLALYRAKGGGRNR 255
           + ER+RA I    V  +     VT SIG+AF +  A     ++ +AD A+Y +K  GRNR
Sbjct: 310 VAERLRALIAKLRVNDEH---PVTASIGLAFAKAPATELGALLSSADSAMYLSKVSGRNR 366

Query: 256 VCMS 259
           V ++
Sbjct: 367 VTVA 370