Pairwise Alignments

Query, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 3e-28
 Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 8/155 (5%)

Query: 110 DALTGLSNRLGLYAACA-------ELGSDYCVAFLDIDHFKAVNDGYSHLVGDLVIASVA 162
           D LTGL NR               E G    +A LD+DHFK +ND Y HL GD V+  VA
Sbjct: 488 DPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRINDNYGHLAGDKVLKIVA 547

Query: 163 RRIKEHFDPPAHVARLGGEEFV-VVQETSPLAFLQMCERVRAAIETTPVAYQDLRITVTI 221
            ++++       +AR GGEEFV ++ +T+P    Q+ E +RA +E  P  ++  R+ +T 
Sbjct: 548 DQLRKRLRGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRATVEACPFHFKGERVVITT 607

Query: 222 SIGVAFRGDAEIFDKVMHNADLALYRAKGGGRNRV 256
           SIG+      E  D+V+  AD ALYRAK  GRNRV
Sbjct: 608 SIGLGAFRSGERSDQVLKRADAALYRAKELGRNRV 642