Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 306 a.a., D-alanine--D-alanine ligase from Pectobacterium carotovorum WPP14

 Score =  192 bits (489), Expect = 6e-54
 Identities = 126/309 (40%), Positives = 170/309 (55%), Gaps = 18/309 (5%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAV-LDELRPDVAFNALH 64
           VAVLLGG S+ER VSL SG A    L+  G     VD  RDV+   L E      F ALH
Sbjct: 5   VAVLLGGTSAEREVSLLSGQAVLAGLKDAGINAHAVDT-RDVSVTTLKEEGFTKIFIALH 63

Query: 65  GPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFDFT 124
           G  GEDGT+QG+LE+L +PYT SGV+ASAL MDK + K+V  A G+PV+    ++R  ++
Sbjct: 64  GRGGEDGTLQGVLEFLGLPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRRQYS 123

Query: 125 SEHP---------LQPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWPFGNQVMVER 175
                        L  P +VKP REGSS G+  V      P  +     +   + ++VE+
Sbjct: 124 ETAANALLAKFTHLGLPLIVKPSREGSSVGMSKVNTLSELPAAL--EEAFRHDDDILVEK 181

Query: 176 YIHGRELTCGVLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAGISPKIYQKIQTL 235
           ++ G E T  +L  E L    + P G  FYDY+AKY +  +++  P+G+  +  Q +  L
Sbjct: 182 WLSGPEYTVAILGDEVLPSIRIQPAG-TFYDYEAKYLSDDTQYFCPSGLPDEQEQALAGL 240

Query: 236 AVMAHQAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGD 295
           A+ A++A+GC G  R DF  D     DG    LEVNT PGMT  SLVP  A   G +F  
Sbjct: 241 AMAAYRAVGCSGWGRVDFMLD----SDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQ 296

Query: 296 LVSWMVEDA 304
           LV  ++E A
Sbjct: 297 LVVKILERA 305