Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 327 a.a., D-alanine--D-alanine ligase from Alteromonas macleodii MIT1002

 Score =  175 bits (443), Expect = 1e-48
 Identities = 120/298 (40%), Positives = 159/298 (53%), Gaps = 13/298 (4%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAVLDELRPDVAFNALHG 65
           VAVLLGG S+ER VSL+SGNA   AL  +G      D        L +L  D A   LHG
Sbjct: 22  VAVLLGGDSAEREVSLNSGNAVLNALLRQGVDAFAFDPAERPLTDLIDLNVDRALIMLHG 81

Query: 66  PFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFDFTS 125
             GEDG++QG L++L IPYT S VL SALAMDK   K+V  + G+P A   + ++  F +
Sbjct: 82  RGGEDGSMQGALQFLKIPYTGSRVLGSALAMDKIHTKQVWQSLGLPTAKYEIADKRHFEA 141

Query: 126 ------EHPLQPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWPFGNQVMVERYIHG 179
                    L    +VKP REGSS G+  V   +     I     + + NQV++E+YI G
Sbjct: 142 GKCSAIMDKLGNEVMVKPAREGSSIGMARVTSAKQLETAI--QDAFKYDNQVLLEQYIDG 199

Query: 180 RELTCGVLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAGISPKIYQKIQTLAVMA 239
            E T  VL G+AL     +   H FYDY AKY    +++  P+G+S +   ++  LA  A
Sbjct: 200 PEFTVSVLQGQALPSIR-MSTPHTFYDYAAKYQDNTTEYYCPSGLSEEQEAQLAKLASRA 258

Query: 240 HQAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGDLV 297
             AI   G  R D   D++     +   LE NT PGMT  SLVP+ A  AG +F +LV
Sbjct: 259 FDAISGSGWGRIDVMQDNQ----RQFYLLEANTVPGMTEKSLVPKAAKVAGLTFDELV 312