Pairwise Alignments

Query, 288 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 1e-30
 Identities = 72/244 (29%), Positives = 125/244 (51%), Gaps = 17/244 (6%)

Query: 20  LMLVGASVVVTACQSDPDIDITKLGVETDPPDV-LYKQGLANMNAGNMTEASRKFEAIDK 78
           L+L+    +  AC S      TK  V+ +  +V LY+    +++  + T A+ K +A++ 
Sbjct: 6   LLLIAILAMTAACSS------TKEVVDENLSEVELYQLAQKDLDNNSFTSATAKLKALES 59

Query: 79  QYPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIGLAYSKQ- 137
           +YPF  +  +A +   +   +  + + A ++  RF+R +P+  +  Y  YM GL    Q 
Sbjct: 60  RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119

Query: 138 ---------ISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARDQLAGREMQ 188
                    +    +D  AA+ +     ++ + YP+S Y  DA+ ++ + R+ LA  E+ 
Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179

Query: 189 VGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQTAAAVLGN 248
           V  YYL R+ Y+AA +R R VVE +Q T  + + LA +TEAY  + L + A T+   L  
Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239

Query: 249 NYPD 252
           NYPD
Sbjct: 240 NYPD 243