Pairwise Alignments

Query, 557 a.a., DNA repair protein RecN from Agrobacterium fabrum C58

Subject, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

 Score =  343 bits (881), Expect = 8e-99
 Identities = 206/560 (36%), Positives = 314/560 (56%), Gaps = 11/560 (1%)

Query: 1   MLVQLSIRDIVLIERLDLSFEAGLSVLTGETGAGKSILLDSLSLALGGRGDGGLVRHGED 60
           MLV LSI +  ++E LDL    G+SV+TGETGAGKSI+LD+L LALG R D G+VR G D
Sbjct: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60

Query: 61  KGQVTAAFEVPNDHPTRLLLRENGLDDDGDLIFRRVQSADGRTKAYVNDQAVSVQMMRQL 120
           K  + A F++ +       L E  LD++G  I RRV +A+GR++ Y+N     +  ++ L
Sbjct: 61  KADILATFDLVDIPEAHTWLAERDLDNEGLCILRRVITAEGRSRGYINGTPCPLGDLKAL 120

Query: 121 GQMLVEIHGQHDDRALVDTDAHRTLLDAFAGLSDEARSVQGLYRTWKDADRALKTHRAKV 180
           G++L++IH QH+ ++L+ TD HR LLD +AG  D AR VQ   + W      L+      
Sbjct: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNSG 180

Query: 181 EAAAREADYLRSSVEELETLSPRDGEEDELAERRAVMQKSERIAG----DIAEASEFLNG 236
           +        L   +EEL+ L   + E ++L +    +  +E + G     I + SE  +G
Sbjct: 181 DEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDSG 240

Query: 237 NASPVPVIASMMRRLERKSHEAPGLLEDTVQLLDAALDSLSNAQMEVEAALRRTEFDPRE 296
           N   +  + S + RL   ++ +P  L +   L+ +A   +  A  E+   L   + DP  
Sbjct: 241 NV--LSALTSSLNRLGAATN-SPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIR 297

Query: 297 LERVEERLFALRAAGRKYNVAVPDLPALAEKMVTDLADLDAGEEKLGKLEANLGIVKADF 356
           L+ +EERL  +    RK+ V   +LP L ++++ +L  L+A +E + +L   L      +
Sbjct: 298 LQALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHY 357

Query: 357 DRAARSLSEKRRNAAEALSGAVMAELPALKLERARFTVEVT-SDPEQATADGIDTVEFHV 415
              AR LS  R+ AA+ L+GAV  E+  L +   RF +E+T ++  + +  G++ +E  V
Sbjct: 358 KEKARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLV 417

Query: 416 QTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQR 475
             NPG     + KVASGGELSR  LA++V  A     PTLVFDE+D G+GG  A+ +GQ 
Sbjct: 418 SANPGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQL 477

Query: 476 LRRLSKTVQVLSVTHAPQVAARAATHLLISKGPSGDGSERIATRVATMEPNHRTEEIARM 535
           LRRL +  QVL+VTH PQVAA+   HL + K  + D +    T VA++    R EE+ARM
Sbjct: 478 LRRLGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTH---TAVASLGKRERVEEVARM 534

Query: 536 LAGASVTDEARAAAARLLAA 555
           L G  +T E+ A A +++ +
Sbjct: 535 LGGIDLTKESLAHARKMVVS 554