Pairwise Alignments

Query, 724 a.a., DNA ligase from Agrobacterium fabrum C58

Subject, 566 a.a., DNA ligase B from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 7e-28
 Identities = 103/409 (25%), Positives = 177/409 (43%), Gaps = 59/409 (14%)

Query: 15  EASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRADSPSKKV 74
           +A +E+A L A LAR D  YH +    ++D  YD    R + ++  F            V
Sbjct: 30  QAKAEVAQLRATLARWDEHYHRQGIALVADELYDQSHERLNHLQQCFA-----------V 78

Query: 75  GFTPLPTFA---PIVHARPMLSLDNTFSEEDLRDFVSSVYRFLGHLPDDSIAFTAEPKID 131
           G +P P  +   P+ H  P   +D     + +  +++                  +PK+D
Sbjct: 79  GTSPSPLASARGPVPHPVPHTGVDKLADRQAVARWMTG-----------KTGVWVQPKVD 127

Query: 132 GLSMSIRYENRKLKTAATRGDGTTGENVTANIRTIKEIPNELPADAPDVVEVRGEVYMAK 191
           G+++S+ Y+  +L    +RGDG  G + + +I  +  +  +LP +A D+  ++GE+Y   
Sbjct: 128 GVAVSLTYQQGRLVQLTSRGDGVHGHDWSRHIPQLGAVTRQLP-EAVDL-HLQGELY--- 182

Query: 192 SDFLALNAQMEADGKQTYVNPRNTASGSLRQLDANVTAKRKLRFFAYALGEVSNGGQPAR 251
              L L+  ++A  K    N R T +G L +          +  F +        G P  
Sbjct: 183 ---LRLDEHVQA--KAGSANARGTVAGLLARKQLTGAQGNAIGLFVW--------GWPHG 229

Query: 252 IADTQYGIVEKFREWGFPVNPLMKRFTSAQQLLEHYNEIGVARPDLDYDIDGVVYKVDRL 311
             + Q   + +    GFP + L        +   H+ E    R  L +  DGV+ +    
Sbjct: 230 -PEQQAERLAQLARLGFPDSQLYSIAIDTLEDAAHWREHWY-RSALPFATDGVILRQGSR 287

Query: 312 DLQERLGFRSRSPRWATAHKFPAEQAFTTVENIEIQVGRTGALTPVARLTPITVGGVVVT 371
              ER  +++++P W  A K+P  QA   V ++  +VGRTG +TPV  + P+T+    +T
Sbjct: 288 PPAER--WQAKAPYWIAAWKYPYAQALAEVRDVRFRVGRTGRVTPVLHVQPVTLDDRRIT 345

Query: 372 NATLHNADYIEGIGNSGERIRPEDHDIRIGDTVIVQRAGDVIPQVLDVL 420
             +L            G   R +  DIR GD V +  AG  IP++  V+
Sbjct: 346 QVSL------------GSLARWQRLDIRPGDQVAISLAGLTIPRLEHVV 382