Pairwise Alignments

Query, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 306 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 15/282 (5%)

Query: 9   LIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWRAF 68
           L AL ++WG ++F I + V+  PP+ +  +R   A + LL    + G +LP    +  A 
Sbjct: 13  LFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAA 72

Query: 69  FGMGLLNNIIPFCLIVWGQTQ-IASGLASILNATTPLFTVIVAHFLTADEKMTGNKLAGV 127
             +GLL   +   ++   + Q + SG+A+++ AT PLFT+  +       K    +  G+
Sbjct: 73  L-IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGI--KTRKLEWVGI 129

Query: 128 LIGFVGVATMIGPAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVPPLMTATGQI 187
            IG  G+  +       G+   WG I IL  +IS++F  ++G R   + V  +  A   +
Sbjct: 130 AIGLAGIIMLNSGGNLSGNP--WGAILILIGSISWAFGSVYGSRI-TLPVGMMAGAIEML 186

Query: 188 SSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTAL---AYLIFFRILASAGATN 244
           ++  +++I + +  +K    A+P L  + A+  +AL  + +   AY+   R ++ A AT+
Sbjct: 187 AAGVVLMIASMIAGEK--LTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATS 244

Query: 245 LALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAI 286
            A V    PV A+LLG+ + GE L    +  + +I   +  +
Sbjct: 245 YAYVN---PVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLV 283