Pairwise Alignments

Query, 240 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 231 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 11/216 (5%)

Query: 6   FREGLKSGFPIALSAAPFGALFGAVAVDNGLSITEATIMSGTVYAGASQLVGIELFGQKV 65
           F  G  +  P++L+ AP+G L G++A+D   S  +A  +S  V+AGA+QLV I +     
Sbjct: 10  FARGAIAVIPLSLACAPWGLLAGSMAIDAQFSPLQAQGLSAIVFAGAAQLVAIGMVKSGA 69

Query: 66  APWLIVLSVFAVNFRHILYSAAIARMISNWSLLQKAAGFFVLVDPQFAESVRKYENTGTV 125
           +   IVL+   +  +H+LY   +  ++S      + +  F+L D  FA  V  Y+   T 
Sbjct: 70  SLISIVLTTLLLTSQHLLYGMHLRPVLSPLKTRWRMSLGFLLTDEFFA-LVSHYDRE-TF 127

Query: 126 GFSWYMGFATPVYVLWLAMTILGASLGNLVGDPKAIGLDVLLPIYFMGMVLSFRQRENFY 185
              + +G     Y++W   T+ G  LG  +     +GL+  +   F+ ++          
Sbjct: 128 NRWYALGVGLTFYIVWNLFTLAGIVLGKSIPGLDQLGLEFSIAATFIALIT--------- 178

Query: 186 PVMLASAAGATVAYHFVGSPWHVSLGAVAGIVVAVL 221
           PV+        VA   + S W   L   + +VV+ L
Sbjct: 179 PVVRDIPTVVCVAVSLLFSVWLSFLHWESAVVVSGL 214