Pairwise Alignments

Query, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  523 bits (1346), Expect = e-152
 Identities = 317/1014 (31%), Positives = 561/1014 (55%), Gaps = 14/1014 (1%)

Query: 17   LFVRRPILAAVLNTLLVVAGLAALVGVEVRELPDVDRPSISVRTTYEGAAPETIDQEVTQ 76
            LF+ RP+   +    +V+AGL A   + V  LP VD P+I V T Y GA+P+ +   VT 
Sbjct: 6    LFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTSAVTA 65

Query: 77   TIEGAVARVSGIKSIASSSQFGTSRVTMEFSDNVDMAVAANDVRDAIGRVTNQLPDDADE 136
             +E    ++ G++ +AS+S  G S +T+ F+ +++M VA   V+ AI   +N LP D   
Sbjct: 66   PLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPSDLPA 125

Query: 137  PQII-KADSDSQPIMRLAVTSSTLSMEDLTKLVDDEIIDRLAAVDGVADVELYGDQEKVF 195
            P +  K +    P++ LA++S T+ +  L  LVD  +  +LA + GV  V + G Q +  
Sbjct: 126  PPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQRQAV 185

Query: 196  RVDLNQAALASRGLTVTDVSNALASAALDVPAGSLKSTTQDIVVRATASLTKPEDFSNLL 255
            R+ +N  ALA+ GL + DV   + ++ ++ P G+    T+  ++ A   L  PE+++NL+
Sbjct: 186  RIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEYANLI 245

Query: 256  IKDN----IRLRDVATVMLGADDQSTSLRSNGVQGVGLGVIRQAQSNTLNISTGVKAAVD 311
            +  N    +RL+DVA ++ GA+++  +  +N    V L + RQ  +N + +   +K  + 
Sbjct: 246  LAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIKGLLP 305

Query: 312  AMSANLPEGTRIVVTSDDAVFIEGALHEVELALGLSALIVVVVLYLFFRDWRATLIPAIT 371
            +++ NLP G  + V +D    I  A+ +V+  L ++ ++VV+V ++F R + ATLIP+I 
Sbjct: 306  SITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLIPSIA 365

Query: 372  MPVALIGTIVAIYMVGFSVNILTLLAIVLATGLVVDDAIVVLENIVRRRAEGMGPRAAAV 431
            +P++LIGT   +Y+ GFSVN LTL+A+ +ATG VVDDAIV+LENI R   EG  P  AA+
Sbjct: 366  VPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPMQAAL 425

Query: 432  LGTQEVFFAVIATTATLAAVFIPLSFLPGQLGGLFREFGFVLAFAVGLSSITALTLCPML 491
             G +++ F +I+ T +L AV IPL F+   +G LFREF   LA A+ +S + +LTL PM+
Sbjct: 426  KGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLTPMM 485

Query: 492  ASRMLKQGLKEPTGPLMW-----FGNVFASTYKTTLAACLNNPLIVIVVALIFSGLSWIA 546
             +R+LK+  KE      +     + +     Y + L   L +  + ++VA+    L+   
Sbjct: 486  CARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVLTVFL 545

Query: 547  FGMIQNELTPREDRASVMMRVTAPQGVSLEYTRDQLQRIEENLQPLRDSGEIRNVYSITG 606
            + ++     P +D   +     APQ  S     ++ Q + + +        + +   + G
Sbjct: 546  YMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSYIGVDG 605

Query: 607  MNGSSNTGFMVLTLAPWADRERTQNQIAADVTSAANKVPALR--GNAMQPNSLRIRGAGN 664
             N + N+G +++ L P  +R+ + +++ + +    +++  +R     +Q  S+  R +  
Sbjct: 606  DNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIEDRVSRT 665

Query: 665  GLQMAMVGSNYPALTEATQKLLLSMEEGGLFDTPRLDNEPNQAQLSVSIDRERASDLGID 724
              Q ++   +   L + + KL+ ++++         D +    Q+ + IDR+ AS LGI 
Sbjct: 666  QYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMASRLGIS 725

Query: 725  ITGLSRSMQSLLEGRSIVDVFVDGDAIPVRLLSSTRPINDPTDLENVFLKTGDGKIVPMS 784
            ++ ++ ++      R I  ++       V L SS      P  LE++ +K  DG  V +S
Sbjct: 726  VSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDGGQVRLS 785

Query: 785  VIATLKENAVAPQLNREQQLPSVGFTANLKDGVSLGQAMEKVNELAQSV-MPSGARLLPL 843
             +A +++      ++   Q P+V  + NL  G SLG+A++ + ++ + + MP G +    
Sbjct: 786  ALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGVQTRFQ 845

Query: 844  GEAATLEENSSGMLLTFGFAIAIIFLVLAAQFESVLSSVIIMSTVPLGLACAVIALLVTG 903
            G A   + + S  LL    A+  +++VL   +ES +  + I+ST+P     A++ALL++G
Sbjct: 846  GAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLALLISG 905

Query: 904  SSLNVYSQIGLVLLVGVMAKNGILIVEFANHL-RDQGATVREAIEKATSIRLRPVMMTMI 962
            + L + + IG++LL+G++ KN I++++FA    R+QG + R+AI +A  +R RP++MT +
Sbjct: 906  NDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPILMTTL 965

Query: 963  ATILGGVPLVLAQGAGAEARIALGWVIVGGLGFATLVTLYITPVSYLLIARFAK 1016
            A + G VPL+LA G+GAE R  LG V+VGGL  + ++TL+ TPV YL   R A+
Sbjct: 966  AALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLAR 1019