Pairwise Alignments

Query, 514 a.a., htrA family protein from Agrobacterium fabrum C58

Subject, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

 Score =  248 bits (634), Expect = 2e-70
 Identities = 139/342 (40%), Positives = 206/342 (60%), Gaps = 12/342 (3%)

Query: 28  APVAARAQSHGPESVADLAEPLLDAVVNISTSQNVKTEGKGPVPPKLPEGSPFQEFFKDY 87
           AP   R    GP S AD       AV N+ T+   K   K   P  L E   F+ FF D 
Sbjct: 58  APQTTRIMQ-GPVSYADAVTLAAPAVANLYTT---KVVNKSAHP--LFEDPQFRRFFGDN 111

Query: 88  FDSQKPEGGEKVNSLGSGFVIDPAGYVVTNNHVIEGADAIEVIFPNGSKLKATLVGTDTK 147
              Q+       +SLGS  ++ P GY++TNNHV  GAD I V   +G +  A ++G+D +
Sbjct: 112 LPKQR----RWESSLGSAVIMSPEGYLLTNNHVTSGADQIVVALKDGRETLARVIGSDPE 167

Query: 148 TDLSVLKVEPKTPLKAVKFGDSRSMRIGDWVMAVGNPFGLGGSLTVGVISARGRN-INAG 206
           TDL+VLK++ K  L A+  G S ++ IGD  +A+GNPFG+G ++T+G+ISA GRN +   
Sbjct: 168 TDLAVLKIDLKN-LPAITIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATGRNQLGLN 226

Query: 207 PYDNFIQTDAAINKGNSGGPLFNMKGEVIGINTAIISPSGGSIGIGFAVPTELAQNIVQQ 266
            Y++FIQTDAAIN GNSGG L +  G +IGINTAI S SGGS GIGFA+P +LA  +++ 
Sbjct: 227 NYEDFIQTDAAINPGNSGGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKS 286

Query: 267 LIEFGETRRGWLGVRVQPVTDDVAASLGMDSAKGALISGVAKGGPVENGPIQAGDVVLKF 326
           ++E G+  RGWLG+ VQP++ ++A S GM    G +++G+ + GP     +  GDV+L  
Sbjct: 287 IVEHGQVIRGWLGIEVQPLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSI 346

Query: 327 DGKDINEMRDLLRIVAESPVGKEVDVVVYRDGKEETVKVKLG 368
           +G+   + R  +  VA     +++ + V R+G++  +  ++G
Sbjct: 347 NGEPAGDGRKSMNQVARIKPNEKITIEVMRNGQQLKLIAEVG 388



 Score = 30.8 bits (68), Expect = 9e-05
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 420 LGMNLVVLSNELRTEKGIAESVEGVLVASVDPGSPAEQKGMKAGDVIVEV 469
           LG+ +  LS EL    G+ +   G++VA +    PA + G+  GDVI+ +
Sbjct: 298 LGIEVQPLSQELAESFGMKDR-PGIVVAGIFREGPAAKAGLHLGDVILSI 346