Pairwise Alignments

Query, 298 a.a., tRNA delta(2)-isopentenylpyrophosphate from Agrobacterium fabrum C58

Subject, 323 a.a., tRNA dimethylallyltransferase (EC 2.5.1.75) from Pseudomonas fluorescens GW456-L13

 Score =  176 bits (447), Expect = 5e-49
 Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 11/294 (3%)

Query: 11  AILITGPTASGKSALALRLARERNGVVINADSMQVYDTLRVLTARPSDHEMEGVPHRLYG 70
           AI + GPTA+GK+ LA+ L +     +I+ DS  VY  + + TA+PS   +   PHRL  
Sbjct: 7   AIFLMGPTAAGKTDLAIELTKVLPCELISVDSALVYRGMDIGTAKPSKELLAQFPHRLID 66

Query: 71  HVPAGSAYSTGEWLRDISGLLSDLRGEGRFPVIVGGTGLYFKALTGGLSDMPAIPDDLRE 130
            +    +YS  ++ RD    ++D+   G+ P++VGGT LY+KAL  GL+DMPA   ++R 
Sbjct: 67  ILDPAESYSAADFRRDALEAMADITARGKIPLLVGGTMLYYKALVEGLADMPAADPEVRA 126

Query: 131 GLRARLIEEGAAKLHAELVSRDPSMAQMLQPGDGQRIVRALEVLEATGKSIRDFQ----- 185
            +       G   LH +L   DP  A  + P D QR+ RALEV   +G+S+   +     
Sbjct: 127 QIEEEAARLGWQALHEQLAVIDPESAARIHPNDPQRLSRALEVYRVSGQSMTALRLQQSA 186

Query: 186 -----RASGPMIIDPERAQKFIVLPERPVLHDRINRRFEAMMDSGAVEEVQALLAL-NLA 239
                 ASG   +    A   I    R VLH+RI +RF  M++ G ++EV AL    +L 
Sbjct: 187 QSTEAAASGLQQLPYTVANLAIAPANRQVLHERIKQRFTLMLEQGFIDEVVALRNRGDLH 246

Query: 240 PDATAMKAIGVAQIADMLTGRMGAAEVIEKSAAATRQYAKRQMTWFRNQMGDDW 293
               +++A+G  Q+ D L G++ +AE+ E+   ATRQ AKRQ TW R+     W
Sbjct: 247 TGLPSIRAVGYRQVWDYLDGKLTSAEMQERGIIATRQLAKRQFTWLRSWTDLHW 300