Pairwise Alignments

Query, 298 a.a., tRNA delta(2)-isopentenylpyrophosphate from Agrobacterium fabrum C58

Subject, 323 a.a., tRNA dimethylallyltransferase from Pseudomonas sp. S08-1

 Score =  189 bits (481), Expect = 6e-53
 Identities = 118/294 (40%), Positives = 159/294 (54%), Gaps = 11/294 (3%)

Query: 11  AILITGPTASGKSALALRLARERNGVVINADSMQVYDTLRVLTARPSDHEMEGVPHRLYG 70
           AI + GPTASGK+ LAL LA E    +I+ DS  +Y  + + TA+P    +E  PHRL  
Sbjct: 8   AIFLMGPTASGKTDLALALADELPCELISVDSALIYRDMDIGTAKPDKATLERYPHRLVD 67

Query: 71  HVPAGSAYSTGEWLRDISGLLSDLRGEGRFPVIVGGTGLYFKALTGGLSDMPAIPDDLRE 130
                 +YS  E+  D    ++++   GR P++VGGT LY+KAL  GL+DMP+    +R 
Sbjct: 68  IRDPAESYSAAEFRADALAAMAEITARGRIPLLVGGTMLYYKALLEGLADMPSADPAVRA 127

Query: 131 GLRARLIEEGAAKLHAELVSRDPSMAQMLQPGDGQRIVRALEVLEATGKSI-----RDFQ 185
            L A    EG   LH EL   DP  A  + P D QR+ RALEV   +G S+     R   
Sbjct: 128 ELEAWAAAEGWEALHRELARVDPQSAARIHPNDPQRLTRALEVYRVSGLSMSVHRERQTA 187

Query: 186 RASGPMIID----PERAQKFIVLPE-RPVLHDRINRRFEAMMDSGAVEEVQAL-LALNLA 239
           + SGP        P    +F + PE R VLH+RI RRF  M++ G VEEV+AL L  +L 
Sbjct: 188 QNSGPEAPGAGQLPYTVAQFAIAPERRQVLHERIARRFHLMLEQGFVEEVEALRLRGDLH 247

Query: 240 PDATAMKAIGVAQIADMLTGRMGAAEVIEKSAAATRQYAKRQMTWFRNQMGDDW 293
               +++A+G  Q+ D L G +   E+ E+   ATRQ AKRQ TW R      W
Sbjct: 248 AGLPSIRAVGYRQVWDYLEGGLNREEMTERGIIATRQLAKRQFTWLRGWENLHW 301