Pairwise Alignments

Query, 668 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 587 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  121 bits (304), Expect = 8e-32
 Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 12/204 (5%)

Query: 324 RILSAVNDTRYNFMFSSNTINDNILETVAHIFRI-PGEGKPISVFQLSGIPSEVVNSVVS 382
           R  S V+  R  F+F +   +  +  T+ ++    P E   ++V  LSGIP EV++  VS
Sbjct: 349 RFESKVSQERLGFLFGAGAKDTTLENTLRNLIGYNPEENANVTVLDLSGIPFEVLSITVS 408

Query: 383 VLCRMSFELAV-----------LARGSLHMLIVCEEAHRYVPADPERGFFPTRQSIAQIA 431
           ++ R+ FE                     +L+V EEAH+YVP      +   +QSI +IA
Sbjct: 409 LISRLIFEHGYHYKVYRTKKGETVNNDAPILLVYEEAHKYVPTSDLAKYRAAKQSIERIA 468

Query: 432 KEGRKYGISLGVISQRPSELDQTILSQCSTVFAMRLSNEIDQKIILSAVPNASTSTTSFL 491
           KEGRKYG++L + SQRPSE+ +TI SQC+   AMRL+N  DQ  +   +P+        +
Sbjct: 469 KEGRKYGVTLLLSSQRPSEISETIFSQCNNFVAMRLTNPSDQNYVRRLLPDTLGKLIEKM 528

Query: 492 SSIGNGEAIAFGEAVNVPMRMRFD 515
            ++G GEA+  G+++ +P  ++ D
Sbjct: 529 PNLGAGEALLIGDSLVMPSLVKID 552



 Score = 68.9 bits (167), Expect = 6e-16
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 17/154 (11%)

Query: 152 LTQDDTINAAISIPQMLAKHFAVVGSTGVGKTTAVSLLLNKAIETDP-----KLRVLILD 206
           L  D  I   +   +   KH AVVGSTG GK+  V+ ++  +    P         +I D
Sbjct: 125 LVTDPDIRVPVDGNRFFNKHIAVVGSTGAGKSNTVTRIIQTSTTKTPSGTQNNSHAIIFD 184

Query: 207 PHNEFAAAFPDHSVVIDTDTLDLPFWLMRLEEFAEVIF-RGRKPVPEEMDFLRDLIPEAK 265
            H+E+ AAFP H+  ID ++L+LP+WL+  +E  EV+   G +    +    R L+ E K
Sbjct: 185 IHSEYKAAFP-HANHIDINSLNLPYWLLNSDELEEVLLDTGERDNYNQSSVFRYLVTENK 243

Query: 266 KAFRGTEGSAVRRTSDKSAITPDTPVPYRIADLL 299
           K          +     + I  D+PV + I ++L
Sbjct: 244 K----------KHNKSHTKIFYDSPVFFDIHEVL 267