Pairwise Alignments

Query, 301 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  170 bits (431), Expect = 3e-47
 Identities = 98/246 (39%), Positives = 140/246 (56%), Gaps = 2/246 (0%)

Query: 48  YRPCLAMVIQGSKSVQLGTDTINYGAGDYLLTSLDLPVAWRVVEASREVPHFCIALAIDS 107
           Y P L +V QGSK  +LG  T+ YGAG YL+ +L +P       A+RE P   +A+ ID 
Sbjct: 50  YEPSLMIVAQGSKLARLGPRTLEYGAGHYLVQALSVPFMCETF-ATREAPLLGVAVGIDR 108

Query: 108 EKLLDLMRRIPIDPSSE-PANAQRGIVVNRATPELLDAAIRLLRLLDRPADIAAMAPLIE 166
             L +L++ + + P +E  A   + +        + ++  RLL  L  P D   + P   
Sbjct: 109 GVLGELVQSMGLAPDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARV 168

Query: 167 QEILYRILTGPAGGQLMNVIAAGSHGNRIARAIAWLRENFARQLRIEELAEQIGMSVSSF 226
           +E+LY  L GP  G L  ++    H  RI  A+A LRE++A  L +E LA +  MSVS+F
Sbjct: 169 REVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTF 228

Query: 227 HHHFKTITAMTPVQYQKQLRLHEARRLMLLERLDAGTAGHRVGYQSPSQFSREYSRFYGL 286
           H HFK  T M P+QY K+LRL +A+++++ E L    A HRVGYQS SQFSREY R +  
Sbjct: 229 HEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFER 288

Query: 287 SPSRDV 292
           SP  ++
Sbjct: 289 SPGDEL 294