Pairwise Alignments

Query, 327 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 341 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  121 bits (303), Expect = 3e-32
 Identities = 89/275 (32%), Positives = 128/275 (46%), Gaps = 18/275 (6%)

Query: 4   LLSAFTAIVSLGFIATAANAAD--LVLYTSQPNEDAQATVDGFKAANPGIEVEWVRDGTP 61
           L  A +A+ SL      A+AAD  L +YT+   E  +     F+ ANP IE++WVRD T 
Sbjct: 7   LAVAVSAVFSL-----QASAADTQLTVYTALEAEQLKTYKQAFEKANPDIEIKWVRDSTG 61

Query: 62  KIMAKLMAEINAGNPVADVLLIADTVTLERMKQAGQLLAHKSAEAKNIDASLYDADG--F 119
            I AKL+AE     P AD +      +L  + Q G L A+   +   I  +  DA     
Sbjct: 62  IITAKLLAEKE--RPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKISGNYRDAANPPA 119

Query: 120 YYSTKLITTGIMYNTAAA-----MKPTSWKDLAKAEAKGLVTMPSPLTSGAALIHAQTLA 174
           +    +    I +NT  A      KP SW+DL K E KG + MP+P +SG   +      
Sbjct: 120 WVGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWL 179

Query: 175 AANG--LGWDYYRQLKANEAIAGGGNGAVLKSVASGEKAYGVVVDYMPIREKAKGAPVEF 232
              G   GW Y   L  N            K  A+GE   G+  +Y  ++ K +GAP++ 
Sbjct: 180 QTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFEYPAVQLKRQGAPLDI 239

Query: 233 VFPEEGVSAVTEPVAIIKGTKHEEAAKKFVDYVLS 267
           V P+EG+    E  A+IKG+   + AK+  D+  S
Sbjct: 240 VLPKEGLGWEIEATAVIKGSPKADVAKRLADFSAS 274