Pairwise Alignments

Query, 327 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 88/301 (29%), Positives = 123/301 (40%), Gaps = 35/301 (11%)

Query: 9   TAIVSLGFIATA---ANAADLVLYTSQ--PNEDAQA---TVDGFKAANPGIEVEWVRDGT 60
           TA++S   +  A   A AAD + + S     +DAQ     V   KA N    ++ V+DG 
Sbjct: 8   TAVLSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATN----IKVVQDG- 62

Query: 61  PKIMAKLMAEINAGNPVADVLLIADTVTLERMKQAGQL--LAHKSAEAKNIDASLYDADG 118
           P    KL A + +GN   DV+ +     L R    G L  L     +   ID       G
Sbjct: 63  PTDYGKLKAMVESGNVQWDVVDVEADFAL-RAASEGLLEPLDFNQIKRDKIDPRFVSDHG 121

Query: 119 ---FYYSTKLITTGIMYNTAAAMKPTSWKDLAKAEA----KGLVTMPSPLTSGAALIHAQ 171
              F++S  L   G       A KP  W  L   +A    + L   PSP     AL+ A 
Sbjct: 122 VGSFFFSFVL---GYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALL-AD 177

Query: 172 TLAAANGLGWDYYRQLKANEAIAG-----GGNGAVLKSVASGEKAYGVVVDYMPIREKAK 226
            +A       D  R  K  + I       GG     + +ASGE + G   +      +  
Sbjct: 178 GVAPDKLYPLDLDRAFKKLDTIKQDIVWWGGGAQSQQLLASGEASLGQFWNGRVYALQQD 237

Query: 227 GAPVEFVFPEEGVSAVTEPVAIIKGTKHEEAAKKFVDYVLSEKGQQGFV-KLGYIPVRAD 285
           GAPV   + +  V A  + + I KG K++EAA KF+    S +GQ  F  K  Y PV  D
Sbjct: 238 GAPVGVSWKQNLVMA--DFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVNVD 295

Query: 286 A 286
           +
Sbjct: 296 S 296