Pairwise Alignments

Query, 327 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 74/283 (26%), Positives = 112/283 (39%), Gaps = 20/283 (7%)

Query: 41  VDGFKAANPGIEVEWVRD--GTPKIMAKLMAEINAGNPVADVLLIADTVTLERMKQAGQL 98
           +  FKA  P I V  +    G+   +  + A  +   P A  ++        +MK  G L
Sbjct: 57  IAAFKAKYPEITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLL 116

Query: 99  LAHKSAEAKNIDASLYDADGFYYSTKLITTGIMYNTAAAMK-PTSWKDLAKAEAKGLVTM 157
             +K +    I  ++ DADG++Y        +  N       P  W DL K E  G V +
Sbjct: 117 QPYKVSTWAEIPDNVKDADGYWYGDYYGVMSMFVNKDLVKNVPKDWADLLKPEYSGQVAL 176

Query: 158 PS-PLTSGAALIHAQTLAAANGL---------GWDYYRQL-KANEAIAGGGNGAVLKSVA 206
              P  S  A++       + G          G  Y+  L KA   +   G    L   A
Sbjct: 177 AGDPRASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTL---A 233

Query: 207 SGEKAYGVVVDYMPIREKAK---GAPVEFVFPEEGVSAVTEPVAIIKGTKHEEAAKKFVD 263
            G     V  DY  +  K       P E V PE+GV A      I     H  AAK +++
Sbjct: 234 QGATPIIVAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWME 293

Query: 264 YVLSEKGQQGFVKLGYIPVRADAGMPEGFPARDKIKVLPLSAA 306
           ++ S+ GQ G++K    P+R +A +  G   ++ I  LP +AA
Sbjct: 294 HLYSDDGQLGWLKGYCHPIRFNAMVKAGKVPQELIDSLPPAAA 336