Pairwise Alignments

Query, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 342 a.a., spermidine/putrescine ABC transporter ATPase from Pseudomonas simiae WCS417

 Score =  221 bits (564), Expect = 2e-62
 Identities = 134/271 (49%), Positives = 163/271 (60%), Gaps = 15/271 (5%)

Query: 1   MAKLILNRLSKNFGAGSKPAVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDG 60
           MA L LN LSK +GA    AV    L V  G F++LLGPSGCGKTT L+MIAGF   S G
Sbjct: 1   MAFLQLNALSKRYGAVD--AVVATDLAVEKGEFVSLLGPSGCGKTTTLQMIAGFVDVSGG 58

Query: 61  SILLGERVLADAGSMVPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKV 120
            ILL  R +  A     P  R + +VFQSYAL+PHMSV DN  + LK+R +   +   KV
Sbjct: 59  QILLDGRDITHA----KPASRGLGVVFQSYALFPHMSVRDNVAFGLKMRKVPAAEIASKV 114

Query: 121 RQALAAVRLESFADRRPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEE 180
           +  L  VRL   ADR P ELSGGQRQRVALAR LV EP V+LLDEPL+NLD +LR+EM+ 
Sbjct: 115 KTVLELVRLAPHADRYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDANLREEMQF 174

Query: 181 TFRDFHARSGATMIYVTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARPEGRLVGSLV 240
             R      G T + VTHDQAEA++++  V VM  GR+ Q+ AP +LY  P  R +   V
Sbjct: 175 EIRRIQCAVGITTLMVTHDQAEALSISDRVVVMQAGRVTQIDAPYKLYEHPRTRFISDFV 234

Query: 241 RQGAILRLPVPDGAPRDLDWAGLRAVM-ESG 270
            +  +L        P D D  G   V  ESG
Sbjct: 235 GKANLL--------PGDYDLLGSPQVRHESG 257