Pairwise Alignments

Query, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 344 a.a., polyamine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  220 bits (561), Expect = 4e-62
 Identities = 131/311 (42%), Positives = 178/311 (57%), Gaps = 30/311 (9%)

Query: 16  GSKPAVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDGSILLGERVLADAGSM 75
           G   AVD VS+ ++DG F ++LGPSG GKTT LR+IAGFEQPS GSI    R+  +  + 
Sbjct: 15  GEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSI----RIHGEEAAG 70

Query: 76  VPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKVRQALAAVRLESFADR 135
           +PP +R++  VFQ YAL+PHM+V DN  Y LKV+G+   +   +  +AL  V L  + DR
Sbjct: 71  LPPYQRDVNTVFQDYALFPHMNVRDNVAYGLKVKGVGKTERMNRAEEALGMVALGGYGDR 130

Query: 136 RPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEETFRDFHARSGATMIY 195
           +P +LSGGQRQRVALAR LV  P V+LLDEPL  LD  LR++M+   +    + G T I+
Sbjct: 131 KPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQLGITFIF 190

Query: 196 VTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARPEGRLVGSLVRQGAILRLPVPDGAP 255
           VTHDQ EA++++  VAV ++GR+ QV  P  LY +P    V   V    ++R        
Sbjct: 191 VTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATSFVAEFVGTSNVIR-------- 242

Query: 256 RDLDWAGLRAVMESGAPLPLADILVRPQDVLRDAEG--------IDCTVTSVLYEGERYA 307
                 G  A    G   P +   +RP+ V R AEG        I   +  + Y+G    
Sbjct: 243 ------GELAQRLGGTAQPFS---IRPEHV-RFAEGPLGTGEVEISGLLHDIQYQGSATR 292

Query: 308 LRLDLPDGQAL 318
             L L +GQAL
Sbjct: 293 YELKLENGQAL 303