Pairwise Alignments

Query, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  217 bits (553), Expect = 3e-61
 Identities = 126/310 (40%), Positives = 173/310 (55%), Gaps = 14/310 (4%)

Query: 9   LSKNFGAGSKP--AVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDGSILLGE 66
           ++K +G       AV  +S  V  G    +LGPSGCGKTT LRMIAG E P+ G+I +G 
Sbjct: 9   ITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPTSGAIFMGG 68

Query: 67  RVLADAGSMVPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKVRQALAA 126
           R +   G    P  RN++M+FQSYAL+PHM+V +N GY L++ G+  ++   + R+AL  
Sbjct: 69  RDVTTLG----PAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARAREALRG 124

Query: 127 VRLESFADRRPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEETFRDFH 186
           V L  F +R P+ELSGGQ+QRVALAR LV EP V+L DEPL+NLD  LR+EM E  R   
Sbjct: 125 VGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEIRALQ 184

Query: 187 ARSGATMIYVTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARPEGRLVGSLVRQGAIL 246
            R   T+ YVTHDQ+EA+A++  + VM  G + Q   P +LY RPE   V   + + ++ 
Sbjct: 185 QRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGEASVF 244

Query: 247 RLPV-PDGAPRDLDWAGLRAVMESGAPLPLADILVRPQ----DVLRDAEGIDCTVTSVLY 301
                PDG+   +    LR             + VRP+         A+G+  T+    Y
Sbjct: 245 PATAQPDGS---VAMGPLRLQPRHAVAPGAVKVAVRPEAWRIGAGGAADGLPATLRKAAY 301

Query: 302 EGERYALRLD 311
            G  Y    D
Sbjct: 302 LGSFYEYGFD 311