Pairwise Alignments

Query, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  214 bits (545), Expect = 3e-60
 Identities = 123/297 (41%), Positives = 178/297 (59%), Gaps = 24/297 (8%)

Query: 1   MAKLILNRLSKNFGAGSKPAVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDG 60
           M  L L+RL K +      A   VSL V DG F++LLGPSGCGKTTVLRM+AG  +P+ G
Sbjct: 1   MPALTLDRLEKRYPG--HVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGG 58

Query: 61  SILLGERVLADAGSMVPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKV 120
            IL+  R +    + +P  RRN+ +VFQSYAL+PHMSV +N  + L+ +G+ G + +++V
Sbjct: 59  RILVDGRDI----TALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRV 114

Query: 121 RQALAAVRLESFADRRPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEE 180
            QALA+VRL +  DR P +LSGGQ+QRVA+AR +   P ++L DEPL+NLD  LR EM+ 
Sbjct: 115 DQALASVRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQI 174

Query: 181 TFRDFHARSGATMIYVTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARP--------- 231
             +      G T ++VTHDQ EAM+++  V V++ G + Q   P  +Y RP         
Sbjct: 175 ELKRLQREVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFI 234

Query: 232 --EGRLVGSLVR-QGAILRLPVPDGAPRDLDWAGLRAVMESGAPLPLADILVRPQDV 285
               RL G +VR  GA   + + DG    L  +    +++  A     D+++R +D+
Sbjct: 235 GRPNRLTGRVVRANGASAAVQLDDGPM--LPASAAEGMVQGAA----VDVVIRQEDI 285