Pairwise Alignments

Query, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 343 a.a., predicted polyamine ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 3e-61
 Identities = 129/315 (40%), Positives = 183/315 (58%), Gaps = 24/315 (7%)

Query: 8   RLSKNFGAGSKPAVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDGSILLGER 67
           ++S+ FG     AVD VS+ + DG F ++LGPSG GKTT LR+IAGFEQPS GSI    R
Sbjct: 9   QVSRTFG--EVKAVDQVSIDIIDGEFFSMLGPSGSGKTTCLRLIAGFEQPSSGSI----R 62

Query: 68  VLADAGSMVPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKVRQALAAV 127
           +     + +PP +R++  VFQ YAL+PHM+V +N  Y LKV+G+   +   +  +ALA V
Sbjct: 63  IQGVEAAGLPPYQRDVNTVFQDYALFPHMNVLENIAYGLKVKGVGKAERHSRAEEALAMV 122

Query: 128 RLESFADRRPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEETFRDFHA 187
            L  +  R+PA+LSGGQRQRVALAR LV  P V+LLDEPL  LD  LR++M+   +    
Sbjct: 123 ALAGYGARKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKLQR 182

Query: 188 RSGATMIYVTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARPEGRLVGSLVRQGAILR 247
           + G T I+VTHDQ EA++++  VAV ++GR+ QV  P  LY +P    V   V    ++R
Sbjct: 183 QLGITFIFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPSTTFVAEFVGTSNVVR 242

Query: 248 LPVPDGAPRDLDWAGLRAVMESGAPLP--LADILVRPQDVLRDAEGIDCT--VTSVLYEG 303
                         G  A+  +G+P P  +   L+R  D +  +  +  +  +  V Y+G
Sbjct: 243 --------------GELAMQINGSPAPFSIRPELIRLGDPVVTSHEVQVSGVLHDVQYQG 288

Query: 304 ERYALRLDLPDGQAL 318
                 L L +GQ L
Sbjct: 289 SATRYELQLDNGQLL 303