Pairwise Alignments

Query, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 341 a.a., spermidine/putrescine ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  213 bits (542), Expect = 6e-60
 Identities = 140/333 (42%), Positives = 189/333 (56%), Gaps = 18/333 (5%)

Query: 4   LILNRLSKNFGAGSKPAVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDGSIL 63
           L LN++S  +G  +  AV D+ L +R G  LALLGPSGCGKTT +R IAG    + G I 
Sbjct: 7   LSLNKVSLAYG--NSIAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVASGRID 64

Query: 64  LGERVLADAGSMVPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKVRQA 123
           L    +    + V   +R + +VFQSYAL+PH++V +N  + LK++G+SG+   +KV   
Sbjct: 65  LDGADI----TRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKTLDDKVASG 120

Query: 124 LAAVRLESFADRRPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEETFR 183
           L +V L +FA R+PAELSGGQ+QRVALAR +V EP V+LLDEPL+NLD  LR EM    +
Sbjct: 121 LKSVGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQ 180

Query: 184 DFHARSGATMIYVTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARPEGRLVGSLVRQG 243
                +G TMI+VTHDQ EA+ALA  + VM  G++ Q+  P E+Y  P    V   V   
Sbjct: 181 RVQKETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSSFVADFVGFE 240

Query: 244 AILRLPVPDGAPRDLDWAGLRAVMESGAPLPLADILV-RPQDVLRDAEGIDCTVTSVLYE 302
            I  L   DGA +  +            P+P A  L  RP+ V   +     TV    + 
Sbjct: 241 NIFAL--EDGALKTAN-----GKTSLTGPVPSASGLAWRPRMVTLGSGPFQGTVRGTSFA 293

Query: 303 GERYALRLDLPDGQALRAYSREAV---AIGDRL 332
           G      LD P G A++A +  A+   AIGD L
Sbjct: 294 GNSREYLLDTPLG-AIKAETDAALAAHAIGDTL 325