Pairwise Alignments

Query, 579 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 403 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  112 bits (280), Expect = 3e-29
 Identities = 65/165 (39%), Positives = 93/165 (56%), Gaps = 4/165 (2%)

Query: 407 LRTLSETDALTGVFNRRA-LEKSVRAILSGDEDYQSLGVMIIDIDHFKSINDRYGHAMGD 465
           L  ++  D LTG+ NRRA L++    +       Q L +++ D+DHFKS+NDR+GH +GD
Sbjct: 209 LEKVASLDDLTGLLNRRAALQRGEELLRFARARRQPLSLLLADLDHFKSVNDRFGHDVGD 268

Query: 466 LALQKTASLLKGALRKTDILARYGGEEFVVVLQDVSHATATATADRLRRLIEVQTFD--- 522
           LAL+  A L+  ++R  D+  RYGGEEF ++L       A ATA+RLR L+E Q  D   
Sbjct: 269 LALKHFAGLVPQSIRANDVAGRYGGEEFCILLPGAEAKGAFATAERLRLLVEEQLRDIGG 328

Query: 523 EQTGLSLTASFGVVWQEARAINSWDELIAIADDRLYEAKRAGRNR 567
              G++LT         +   ++  +LI  AD  LY  K  GRNR
Sbjct: 329 HDIGVTLTVGAATYIPGSAGPDTIADLIIAADGALYAGKALGRNR 373