Pairwise Alignments

Query, 295 a.a., tRNA/rRNA metyltransferase from Agrobacterium fabrum C58

Subject, 345 a.a., hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 20/294 (6%)

Query: 2   SKDDPNDKSTRDTHYATLRRAVRDAKRERGEIPTPQQPKRRNRGADDWKPPQLA----PD 57
           ++D+ N++S    H  +  R V  A  +     TP++          +  P++      +
Sbjct: 51  ARDERNNQSRDRKHETSPWRTVSRAPGDE----TPEKVDHGGISGKSFIDPEVLRRQRAE 106

Query: 58  QVHLYGLHTVRAALSNPQRQLIKL----SVTLNAFARLDIGEADAQPFPVEIVSPQEIDK 113
           +  +YG +  +A   +    +++     SVT      L    A+ + +   +V   E+ K
Sbjct: 107 ETRVYGENACQALFQSRPDAIVRAWFIQSVTPRFKEALRWMAANRKAY--HVVDEAELAK 164

Query: 114 VLGPEAIHQGVML---ETRPLPVKK-LDALKKSPLILVLDQVTDPHNVGAIMRSAVAFNA 169
             G E  H GV     +     VK+ +        +L L+ V +PHN+G +MRS   F  
Sbjct: 165 ASGTEH-HGGVCFLIKKRNGTTVKQWVKQAADQDCVLALEDVANPHNLGGMMRSCAHFGV 223

Query: 170 GAVITTIRHSPTESGVLAKSASGALELIPYIQITNLADTLGELHKLGFFSVGLDSEGPAP 229
             V+     +  ESG   ++A G  E +  I   ++ D L +  + G+  V   S+    
Sbjct: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGESIVDVLDDFRQAGYTVVTTSSDRGQA 282

Query: 230 IEQTFTGAKIALVLGAEGKGLRQKTRETVSALARLDMPGEIKSLNVSNAAAIAL 283
           +  T    K+ LVLG E   L +  RE      +++  G ++SLNVS A  + L
Sbjct: 283 LFSTTLPEKMVLVLGREYDYLPEAAREPDDLCVKINGTGNVESLNVSVATGVLL 336