Pairwise Alignments

Query, 736 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

Subject, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

 Score =  587 bits (1513), Expect = e-172
 Identities = 332/739 (44%), Positives = 440/739 (59%), Gaps = 26/739 (3%)

Query: 8   LDSCGAEPIHIPGAIQEHGALLVLSAREFSVVQASDNLANYIGV-----------DLPIG 56
           ++ C  EPI +PG+IQ HG LLVL A +  V+QAS+N+ +++G+           DL   
Sbjct: 18  MERCAQEPIQVPGSIQPHGFLLVLDATDLRVLQASENVEHWLGLPARELIGCHFADLVHE 77

Query: 57  AVATEANLPFI--SVLSAWYSGEESNFRYAWAEKKLDVSAHRSGTLVILEVEKAGVGESA 114
                A+L  +    +  ++ G+    + A     L +  H    ++I E E   +    
Sbjct: 78  GFDLHAHLTRLPEDEVFPFHIGDVRLRQGAPISALLHMLVHCHDQVLIAEFEPPRLPAD- 136

Query: 115 EKLMGE------LTSLAKYLNSAPSLEDALFRTAQLVSSISGHDRTLIYDFGLDWSGHVV 168
             L+G+      + S    L  A S+ED L +T   +  I+G  R   Y F  + +G V+
Sbjct: 137 --LVGQGDYYPLVRSFVASLQVASSIEDLLQQTVLQLKRITGFGRVKAYRFDAEGNGQVL 194

Query: 169 AEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMIPDVDYKPVPIRPEVNAETGAVLD 228
           AE      PSY GL FPA DIP QAR+LY +NR+R+I D +Y+P P+ P  N  TG  LD
Sbjct: 195 AEVVDPGYPSYAGLCFPAADIPRQARELYRVNRIRVIEDANYQPSPLLPATNPRTGKPLD 254

Query: 229 MSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGALWGLIACHHATPHSVSLAVREACDF 288
           MSF+ LRSVSPVHL+YMRNMGT ASMS+SIVV+G LWGLI+CHH  P  V L  R AC+ 
Sbjct: 255 MSFAALRSVSPVHLQYMRNMGTLASMSLSIVVDGQLWGLISCHHQQPRPVDLRTRTACEL 314

Query: 289 AAQLLSMRIAMEQSSQDASRRVELGHIQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVG 348
            A +LS++I   +S     + + L     R++  MA  +   DGL       E LL    
Sbjct: 315 LASVLSLQIESRESHASTRKLLTLRQHIVRMISSMADHDSVSDGL---RDLPEVLLAFAD 371

Query: 349 ADGAALVLGDDYELVGNTPSREQVEELILWLGEREIADVFATDNLAGNYPTAAAYASVAS 408
           A GAA++  +  +L+G TP   QV  L+ WLG+R+   VF +DNL  +       A+ A 
Sbjct: 372 AQGAAVISAERCDLIGQTPPEAQVTALVHWLGQRDEDKVFHSDNLRRDITELPELANHAG 431

Query: 409 GIIAMRVSELHGSWLIWFRPEVIKTVRWGGDPHKTVQESGRIHPRKSFEIWKEQLRNTSF 468
           G++A+ +S++H  +L+WFRPE I+TV W G P K V   G + PR SFE W+E+ R  S 
Sbjct: 432 GVLAVAISQIHSHYLLWFRPEQIRTVNWAGQPTKQVGPQGNLDPRHSFERWQEEQRGYSQ 491

Query: 469 PWSEPELAAARELRGAIIGIVLRKTEEMADLTRELQRTNKELEAFSYSVSHDLRAPFRHI 528
            W    +    ELR A++GIVLRK EE+A L  EL+R+NKELEAFSYSVSHDLRAP RHI
Sbjct: 492 AWDPLVIEGVIELRAAVLGIVLRKAEELAQLAGELRRSNKELEAFSYSVSHDLRAPLRHI 551

Query: 529 VGFAQLLRE-RSDALDEKSLHYLQMISEAALGAGRLVDDLLNFSQLGRTQLTLKPVDMQK 587
            G+ +LL E     L E+   +LQ I EAA  AG LVD+LLNFSQ+GR+ L L  VD+  
Sbjct: 552 AGYTELLGEIEGQGLSERGKRFLQHIGEAAHFAGSLVDNLLNFSQMGRSALRLSDVDLNA 611

Query: 588 VVSEVRRSLSHAVSDRQIEWRIGALPVIFGDPTLLRQVWYNLIENAIKYSSREPVSIITI 647
           +V  +R  L+     R I W I  LP + GDP  +    +NLI NAIKY+     + I I
Sbjct: 612 LVEAIRSELAPDYEGRAIVWDIAPLPKVIGDPAFINMALHNLIANAIKYTRGRTPARIEI 671

Query: 648 SAVETEDDVTYSVEDNGVGFDMAYYNKLFGVFQRLQRVEDFEGTGIGLALVRRIVERHHG 707
           SAV+  ++    + DNGVGFDMAY NKLFGVFQRL R+EDFEGTGIGLA VRRI+ERH G
Sbjct: 672 SAVQHPEETEVCIRDNGVGFDMAYANKLFGVFQRLHRMEDFEGTGIGLASVRRIIERHDG 731

Query: 708 LVGAEGTVGEGATFSFTLP 726
            V A G V +GA+F FTLP
Sbjct: 732 RVWATGQVDQGASFHFTLP 750