Pairwise Alignments

Query, 484 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1166 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

 Score = 94.4 bits (233), Expect = 2e-23
 Identities = 86/271 (31%), Positives = 133/271 (49%), Gaps = 35/271 (12%)

Query: 212 RHLEERVEERTRDLRRANQEIQRFAYIVTHDLRAPLVNIMGFLSEFDTSLKPVTRYVLAD 271
           R ++  +E+R  +L+RA++    F   ++H+LR PL + +            +   +L D
Sbjct: 467 RRVQRDLEDRADELQRASRYKSEFLANMSHELRTPLNSAL------------ILAKLLGD 514

Query: 272 GESLPEDVIREARLAVEEDIPEAIGFIRSSTRKMDQLINAILKISRDGQRKLQ--PEKVD 329
               P+  +   ++   E I        SS   +  LIN IL IS+    KL+  PE V 
Sbjct: 515 N---PQGNLSPEQVKFAESI-------YSSGNDLLVLINDILDISKVEAGKLEVVPEDVP 564

Query: 330 IETLLSSLSETVRH---QINANGG-EIEVDTPKLTIVTDRISLDQILGNLFDNAVKYQMP 385
           +  L  SL  T R    Q N +   +I  D P  ++VTD   ++QIL NL  NA+K+   
Sbjct: 565 LRRLAESLETTFRPLAMQKNLSFRLDIRPDAPG-SLVTDSQRVEQILKNLLSNALKFTDR 623

Query: 386 GRPLRLTARAYPAGRGAICIEVADNGRGIGEQDLERVFELFRRAG---SQDQPGEGIGLA 442
           G    + +       G     V+D+G GI  Q  E +FE FR+A    S+   G G+GL+
Sbjct: 624 GEVALVVSGT---ADGGAAFAVSDSGIGIDPQQHELIFEAFRQADGTTSRRYGGTGLGLS 680

Query: 443 HVRSLIRNLGGDIKVESKLGEGSTFVLLMPS 473
             R L + LGG + V+S+ G+GSTFVL +P+
Sbjct: 681 ISRDLTQLLGGTLAVQSQPGQGSTFVLQLPA 711



 Score = 49.7 bits (117), Expect = 6e-10
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 18/158 (11%)

Query: 5   GVAILIGMVSMSL----WLVQVNNRYSQETAELRRFRAAVLDVLTTMQDIETGQRGYLLT 60
           G  + +G++   L    W V+  +R ++  +EL+R             D+ETG RG+L+T
Sbjct: 30  GAVVFVGLILFLLNTIGW-VEHTDRVTRAASELQRQSI----------DMETGMRGFLIT 78

Query: 61  NNRDYLGPYEEALRDLPQRQSRLFDLLKEEEQYKQSLSGLRQAIDAKLAETRETIDLQRS 120
            +  +L PY+ AL  +    + L +L+ +  Q  + L  +       +   R  I  +R+
Sbjct: 79  GDETFLEPYQSALPRMKTDTAALRELVSDNRQQVERLDRIAAIQGTWIEFARSLIAARRA 138

Query: 121 GRITEAVEVVRNNDGKRFMNEIRIILSDLQSDTDDRLR 158
           G   +A   VR   GKR  +++R   +    DT+  LR
Sbjct: 139 GE--DAQAQVRLGRGKRLTDDMRAEFTAF-IDTEQALR 173