Pairwise Alignments

Query, 484 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 668 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  108 bits (271), Expect = 4e-28
 Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 32/264 (12%)

Query: 215 EERVEERTRDLRRANQEIQRFAYIVTHDLRAPLVNIMGFLSEFDTSLKPVTRYVLADGES 274
           E+ ++ +  +L R+N ++++FAY+ +HDLR PL  +  F+S  +    P           
Sbjct: 432 EQALKAQATELSRSNADLEQFAYVASHDLREPLRQVASFVSLLERRYGP----------- 480

Query: 275 LPEDVIREARLAVEEDIPEAIGFIRSSTRKMDQLINAILKISRDGQRKLQPEKVDIETLL 334
                       +++D  + I + R   ++MD+LI  +L  SR G      ++V++ +++
Sbjct: 481 -----------TLDDDARDYITYAREGAKRMDRLIIDLLDFSRIGHHSQAVQQVNLGSVI 529

Query: 335 SSLSETVRHQINANGGEIE--VDTPKLTIVTDRISLDQILGNLFDNAVKYQMPGRP--LR 390
                 +   I  +G +++   + P L +V D   + ++  NL  NA+KY  P R   +R
Sbjct: 530 DEAIANLGTVIVEHGAQVDRAAEMPVLGLVRD--DMVRLFQNLIGNALKYHHPERTPIVR 587

Query: 391 LTARAYPAGRGAICIEVADNGRGIGEQDLERVFELFRRAGSQDQ-PGEGIGLAHVRSLIR 449
           + AR    G     + V DNG GI  Q  ER+F +F+R  ++D+  G GIGLA  + ++ 
Sbjct: 588 IAARRDDEG---WVVSVIDNGLGIDPQFSERIFGIFQRLHTRDKFEGTGIGLAICKKIVE 644

Query: 450 NLGGDIKVESKLGEGSTFVLLMPS 473
             GG I VE   G GS F + +P+
Sbjct: 645 RAGGRIWVEPAEGGGSVFNVRLPA 668