Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 188 a.a., Sigma-70 region 2 from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  102 bits (255), Expect = 3e-27
 Identities = 55/170 (32%), Positives = 98/170 (57%), Gaps = 9/170 (5%)

Query: 16  GDRSAFVSLYQATSPKLFAICLKILRDRTEAEEALQEIYIKVWQRARTFAVSAGKPATWL 75
           G++ A   LYQ  S +L  +  +++RDR  AE+ + + ++K+W  A +F  S G    W+
Sbjct: 20  GEKQALQRLYQQESARLLGVAQRLVRDRALAEDIVHDAFLKIWSHAASFDASRGSARGWI 79

Query: 76  ATIARNHAIDTIR--ARKPASDDIDEAYDLVDESIRDPEQQVV-----LVDEGRRIDDCM 128
            ++ R+ A++T+R   R+   +D D + D  +++  +  Q++       V+ GR I  C+
Sbjct: 80  FSVTRHLALNTLRNTTREVRVED-DGSEDHHEQATLEGWQEIGDAFDWQVNPGR-ITSCL 137

Query: 129 RELETVHAQAVRRAYVEGLSYLELSDELRVPLNTVRTWLRRSLLKLRECM 178
            +LE V    +  AYV+G S+ E++ ++  PL TV+ W++RSL  LRECM
Sbjct: 138 EQLEPVRRNCIFHAYVDGYSHQEIAQKIGAPLGTVKAWIKRSLTALRECM 187