Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 213 a.a., DNA-directed RNA polymerase sigma-70 factor from Ralstonia solanacearum PSI07

 Score =  125 bits (313), Expect = 6e-34
 Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 5/182 (2%)

Query: 2   QGTEIATLINRVGMGDRSAFVSLYQATSPKLFAICLKILRDRTEAEEALQEIYIKVWQRA 61
           +  E+A L+ R+G+G+R A  +LY     KLF + L+IL  R  AE+ LQE ++ +W+ A
Sbjct: 29  EADELAALLQRIGLGERDALRTLYACCGAKLFGLALRILVRRDWAEDVLQESFVNIWRHA 88

Query: 62  RTFAVSAGKPATWLATIARNHAIDTIR----ARKPASDDIDEAY-DLVDESIRDPEQQVV 116
             +      P TW+ATI RN A+D +R     R   S  +D+ + D + +    P    +
Sbjct: 89  ADYRPQRAAPMTWMATIVRNRALDCLRRQRAERVAESVPLDDTHADALADHAPGPADLAL 148

Query: 117 LVDEGRRIDDCMRELETVHAQAVRRAYVEGLSYLELSDELRVPLNTVRTWLRRSLLKLRE 176
              + R + +C++ L+    + +  AY+  LS+ EL+  L VPL TV++W+RR L +LRE
Sbjct: 149 AGQQARALAECLKRLDPRQREVISLAYLRDLSHSELAQTLSVPLGTVKSWMRRGLDRLRE 208

Query: 177 CM 178
           C+
Sbjct: 209 CL 210