Pairwise Alignments

Query, 272 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 269 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 3e-29
 Identities = 81/243 (33%), Positives = 118/243 (48%), Gaps = 14/243 (5%)

Query: 5   LTSALFPGHVTHARFKPKTHKLAYRIYSLLLDLDELEMLDRNLRFFSVDRFNLFSFHRRD 64
           + S+L  G ++H R  P+ H   YRI    LDLDE   L    R+    R     +   D
Sbjct: 1   MNSSLCVGWISHRRLTPRVHAFRYRIGMFYLDLDEQSWLMGLSRWLGRWRLAPLCWRETD 60

Query: 65  RGDGSAIGLRRQIETAMTAAGIAVDG-------GPIRLLTMPRLLGWAFNPLSVFFCYGR 117
                   L RQ E+   AA + V         G ++LLT  R  G +FNP+S +FC+ R
Sbjct: 61  Y----LPALTRQGESLAQAARLLVGQATGHLPEGRVQLLTQLRCWGLSFNPVSFYFCHDR 116

Query: 118 DMSLKAILWEVDNT-FGQRHSYLIPVEIGKETEIVQRCDKAFYVSPFMDMDLRYVFRVVP 176
           D  L AIL EV NT + +R  Y++PV+            KAF+VSPFM +D+ Y  R   
Sbjct: 117 DGCLTAILMEVRNTPWRERFHYVLPVQGNLARPF--SVGKAFHVSPFMPLDMDYRLRFFL 174

Query: 177 PGDRLKIVIETFDDDGIVLTARHLGRRVELTDGALLKAFATIPFLTLKVVLGIHWEALKI 236
             D ++I ++ +     V  A    RR  L   AL +     P+++L+ V  I+W+AL++
Sbjct: 175 DTDHVRIQMQNWQGGTKVFEADLALRRKPLDGAALRRYVLNFPWMSLRTVSAIYWQALRL 234

Query: 237 WLK 239
            LK
Sbjct: 235 LLK 237