Pairwise Alignments

Query, 273 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 260 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  139 bits (351), Expect = 5e-38
 Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 1/252 (0%)

Query: 18  GVVAGLLAGLFGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSVRSFLTH 77
           G  AG+LAGLFG+GGG ++VPV    F L      V  HL++GTSLA I+ TSV +   H
Sbjct: 10  GACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLATIIFTSVNAVREH 69

Query: 78  RQKGAVDIDLLKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALAFRMIVNRASWQ 137
            ++GAV   +     V + +G    ++ A   S   L+ I    AL +A ++ ++    +
Sbjct: 70  HRRGAVRWPIFVWMTVGILIGAGFGALTAEAISGPHLQKIIGVFALLVAVQLALD-VKPK 128

Query: 138 LGSDLPKNPARFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISL 197
               +P      + GT IG  S + G+GGG +   F+T     + QAVATSS  G+ I+L
Sbjct: 129 ASRTVPGKLGLTVAGTFIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSACGLPIAL 188

Query: 198 PGLLGYIWAGWGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFG 257
              L ++  GW +  LP  S GF+   A++ +   +++ A +G RLAH LS + L+R F 
Sbjct: 189 ASALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFA 248

Query: 258 VFLVFVAAQFFY 269
             L  V   F +
Sbjct: 249 GLLFCVGINFLF 260



 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 150 LVGTGIGLLSGLMGVGGGVMNNTFM----TLYGRT----IHQAVATSSGVGVLISLPGLL 201
           L+G   G+L+GL GVGGG++    +    TL G       H AV TS    +  S+    
Sbjct: 8   LLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLATIIFTSV---- 63

Query: 202 GYIWAGWGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFGVFLV 261
                   NA       G + W   V +    L+ A +G   A A+S   L++  GVF +
Sbjct: 64  --------NAVREHHRRGAVRWPIFVWMTVGILIGAGFGALTAEAISGPHLQKIIGVFAL 115

Query: 262 FVAAQFFYSV 271
            VA Q    V
Sbjct: 116 LVAVQLALDV 125