Pairwise Alignments

Query, 273 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 273 a.a., Integral membrane protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  160 bits (404), Expect = 4e-44
 Identities = 87/265 (32%), Positives = 138/265 (52%), Gaps = 1/265 (0%)

Query: 7   ILVFAAALAAAGVVAGLLAGLFGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAII 66
           +L   A L  AG VAG L G+ G GGG +L+PV YH F +L V   +RMHL +GT+LA +
Sbjct: 9   LLGIGALLVVAGGVAGFLGGMIGAGGGLILIPVLYHSFAVLGVDADIRMHLVVGTALATV 68

Query: 67  VPTSVRSFLTHRQKGAVDIDLLKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALA 126
           VPTS+     H Q+G VD  ++K     V LG +LA  +     S  L L FA +A  ++
Sbjct: 69  VPTSILGMRVHWQRGNVDTGIVKRLAPPVLLGAVLAGAMVGKIHSAGLTLAFAIVAAVVS 128

Query: 127 FRMIVNRASWQLGSDLPKNPARFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVA 186
             M+ ++ S  L   LP   A  L+G  IG LS  +G+GG  +    +      +  A+ 
Sbjct: 129 LNMVFSK-SLSLRQGLPGPCATGLMGVSIGALSTWVGIGGATLTVPLLHALHTPMPVAIG 187

Query: 187 TSSGVGVLISLPGLLGYIWAGWGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHA 246
           T+S +G ++ LPG + ++  GWG+A  P  S G+++ +   ++ P +      G R    
Sbjct: 188 TASVLGAMVGLPGAMAFMVNGWGDARTPLGSLGYVHVLVAAIVFPASASAMALGARFTRR 247

Query: 247 LSKKQLERAFGVFLVFVAAQFFYSV 271
           ++ + L   F + +   A +  +S+
Sbjct: 248 VNVRVLRLMFAMLMAVTAVRMLWSL 272