Pairwise Alignments

Query, 511 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 870 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  155 bits (393), Expect = 4e-42
 Identities = 97/254 (38%), Positives = 149/254 (58%), Gaps = 6/254 (2%)

Query: 234 KDDLIAELEVANSVSDEARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLG 293
           K+D+ A  + A      A + AE+AN AK+ FL+ MSHELRTPL A+LG++E++ S + G
Sbjct: 612 KEDITAR-KAAEDALVAAMQAAEDANRAKTVFLSHMSHELRTPLTAVLGYTEMLESGMAG 670

Query: 294 PLNNPLYKEYSGDIHRSGQHLLDLINEILDLSRIEAGRYDLNEESISMLEIAEDCIGMIQ 353
           PL +  + ++   I  SG+HLL +I+E+LD+SRIE G Y +      +  IA++C+GM++
Sbjct: 671 PLPSQ-HADFVAAISDSGRHLLSIIDEVLDISRIELGSYRIATGPTDLRSIAQECVGMLR 729

Query: 354 LRARAKNIRISQQFEASLPQVWADEKSIRQVILNLLSNAVKFTPQGGEILVKAGWT-AGG 412
            +  AK+I++  +   ++P V  D +++RQV++NLL NAVK+T  GG I V  G T AG 
Sbjct: 730 PQCVAKDIQLDLEEGGAMPLV-TDSRAVRQVLINLLGNAVKYTEAGGRISV--GLTRAGQ 786

Query: 413 GQYVSIRDNGPGIPEDEIPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILK 472
              V + D G GI  D++  V   F +         +G GLGL I + I+    G   ++
Sbjct: 787 TLRVVVADTGCGIATDKLAHVFEPFQRVDPLRADPARGVGLGLAICRRIVELLHGDIAIQ 846

Query: 473 SKLREGTEGIAILP 486
           S+   GT     LP
Sbjct: 847 SEPGRGTAVTLTLP 860