Pairwise Alignments

Query, 511 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 676 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  197 bits (500), Expect = 1e-54
 Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 1/242 (0%)

Query: 250 EARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLGPLNNPLYKEYSGDIHR 309
           EA+  AE  N AK+ FLA++SHELRTPLNAI+GFSE+M  E+ GPL    Y+ Y  DIH 
Sbjct: 427 EAKDEAERGNRAKNTFLANISHELRTPLNAIIGFSEMMKHEIFGPLEPASYRTYVDDIHE 486

Query: 310 SGQHLLDLINEILDLSRIEAGRYDLNEESISMLEIAEDCIGMIQLRARAKNIRISQQFEA 369
           SG HLL+LIN+ILD+S+ EAG  DL E ++ + ++    I ++  RA    I +S+    
Sbjct: 487 SGMHLLELINDILDMSKAEAGMTDLMEAAVHVPDLVRGAIRLLTRRAENAGITLSEDLPP 546

Query: 370 SLPQVWADEKSIRQVILNLLSNAVKFTPQGGEILVKAGWTAGGGQYVSIRDNGPGIPEDE 429
           +LP + ADE+ +RQVILNL SNAVKFT  GG + + A  T   G  +++ D G G+  +E
Sbjct: 547 TLPLLLADERRLRQVILNLGSNAVKFTDDGGAVTIGAKVTE-AGFIITVADTGIGMTPEE 605

Query: 430 IPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILKSKLREGTEGIAILPAKR 489
           +  V+  F Q    +    +G+GLGLP+ +A++  H G   L S+   GT      P  R
Sbjct: 606 LLRVMEPFVQADTRLSRKYEGSGLGLPLAKALICAHGGTLHLDSQPGRGTVATVTFPPSR 665

Query: 490 VL 491
           ++
Sbjct: 666 II 667