Pairwise Alignments

Query, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  201 bits (510), Expect = 3e-56
 Identities = 117/298 (39%), Positives = 171/298 (57%), Gaps = 7/298 (2%)

Query: 28  AATTTLRIGWQKNG-VIALAKSQGALEALLKDRGIEVKWSEFSSGPPLLEALGAGALDIG 86
           +A  TLRIG+QK+  ++ L K++G LE  L+  GI V W EF SG PLLEAL  G +D+ 
Sbjct: 24  SAEQTLRIGYQKSSTLLTLLKARGTLEQRLQAEGIRVTWHEFPSGLPLLEALNLGNVDLS 83

Query: 87  P-TGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILVQKDSPLKTLEDLKGKKVAFKRGSSA 145
               D  P+F QAAG  L Y      +    AILV  DSPLKTL DLKGK+VA  + + +
Sbjct: 84  ADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILVPADSPLKTLADLKGKRVAVTKAAGS 143

Query: 146 HNVTVKALRKAGLTLSDITPVDLAPPDAAAAFRSGSIDAWSIWDPYFAVAEKEPTTRVLS 205
           H + ++AL KAGLT  DITP  L P D  AAF +  +DAW  WDPY A A+++   R+L 
Sbjct: 144 HYLLIQALAKAGLTFKDITPAYLIPADGRAAFENHKVDAWVTWDPYVASAQRQQNARILV 203

Query: 206 TAEGIVDPWSYFLANGDFVEANPDLVPLILKELANVGAKAQANIDATAKSLAAITGVPED 265
               +     Y+LA  D+ +A+P+++  +   L   GA  +AN +A A+ L  + G  + 
Sbjct: 204 DGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAGAWTKANPEAAARILGPLWGNLDS 263

Query: 266 VT-KVSLTRPGADLGRVSLVPDEAIAYQQALADEFYDLKIVPKKLKVTDI-VWRPKAS 321
            T + +  R   D+  V L   + +A QQ +AD FY   ++PK +  + + V++P ++
Sbjct: 264 ATVQQANARRSYDVQPVKL---DNLAEQQRIADAFYREGLLPKAVDTSAVDVYQPPSN 318