Pairwise Alignments

Query, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 1e-44
 Identities = 100/282 (35%), Positives = 154/282 (54%), Gaps = 9/282 (3%)

Query: 32  TLRIGWQKNGVIALAKSQGALEALLKDRGIEVKWSEFSSGPPLLEALGAGALDIGPTGDV 91
           TLRIG QK  + A  ++  AL    +D   +++W+EF +  PL EAL AGA+D G  GD 
Sbjct: 27  TLRIGDQKGNMRAQLEAADAL----RDLPYDIRWAEFPAAAPLAEALNAGAIDAGIIGDA 82

Query: 92  PPLFAQAAGGNLRYVGTYKAAAGGSAILVQKDSPLKTLEDLKGKKVAFKRGSSAHNVTVK 151
           P LF  A+G  ++ +   K+   G+A+LV+ ++PL++  +LKGK++A  RGS  H++ +K
Sbjct: 83  PLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPLRSAAELKGKRIATGRGSIGHHLALK 142

Query: 152 ALRKAGLTLSDITPVDLAPPDAAAAFRSGSIDAWSIWDPYFAVAEKEPTTRVLSTAEGIV 211
           AL +AGLT  D+    L P DA  A  +GS+DAWS W+PY A+AE     RVL    G+ 
Sbjct: 143 ALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAWSTWEPYTALAELSGQGRVLVNGRGLS 202

Query: 212 DPWSYFLANGDFVEANPDLVPL--ILKELANVGAKAQANIDATAKSLAAITGVPEDVTKV 269
              S+  A    +E       L   L  LA     A  ++D  +K+LAAI G P +  ++
Sbjct: 203 TGNSFLAATDKALEEPGRRAALQDYLNRLAAAQVWANQHLDTYSKTLAAIIGFPVEAARL 262

Query: 270 SLTRPGADLGRVSLVPDEAIAYQQALADEFYDLKIVPKKLKV 311
              R      R  ++  + +  QQ  AD ++   ++ ++L V
Sbjct: 263 QFERRQL---RWQVIDTQTVTEQQDTADFYHTHGLMTERLDV 301