Pairwise Alignments

Query, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

Subject, 335 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 96/323 (29%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 6   GTLGLLAGSTGAVFLPHIRRAGAATTTLRI-------GWQKNG--VIALAKSQGALEALL 56
           G  GLL+G    +   H     A+ T +RI       G Q +G  ++ L  SQ  LE   
Sbjct: 5   GKHGLLSGLLALMMFWHAGAQAASATEIRIAVSDIGAGSQPSGGGLVDLIFSQKRLEREF 64

Query: 57  KDRGIEVKWSEFS-SGPPLLEALGAGALDIGPTGDVPPLFAQAAGGNLRYVGTYKAAAGG 115
              GI V+W     +GP + E      +D+   GD+  +  ++ G +   +G   AA G 
Sbjct: 65  ARDGISVRWLFIKGAGPVINEGFANHQIDMAYLGDLASIIGRSRGLDSVVIGA--AARGV 122

Query: 116 SAIL-VQKDSPLKTLEDLKGKKVAFKRGSSAHNVTVKALRKAGLTLSDITPVDLAPPDAA 174
           +  L V + SP+  LEDLKGK+V   RG++A    V AL   GL+ SD+  ++L    A+
Sbjct: 123 NHYLAVSRGSPIHRLEDLKGKQVGLFRGTAAELSFVTALHSRGLSESDMKIINLDFAAAS 182

Query: 175 AAFRSGSIDAWSIWDPYFAVAEKEPTTRVLST--AEGIVDPWSYFLANGDFVEANPDLVP 232
           AA  +G IDA        A+ +K      +ST   +G        L  GDF   N D++ 
Sbjct: 183 AALAAGQIDATWGGSNALALRDKGLADIAVSTRDLQGAGQLSGLILVAGDFARQNQDVLA 242

Query: 233 LILK--ELANVGAKAQANIDATAKSLAAITGVPEDVTKVSL--TRPGADLGRVSLVPDEA 288
            I+K  + A+  A    N D   + LA  +G PE + +  L    P + L    L P   
Sbjct: 243 RIIKVQKEASAWASQPTNRDNYIQLLATQSGYPEPLLREDLDGMPPLSHLLSPELDPAFV 302

Query: 289 IAYQQALADEFYDLKIVPKKLKV 311
              +Q++A   Y+ K++ K   V
Sbjct: 303 AILKQSVA-LAYEAKLIRKSFSV 324