Pairwise Alignments

Query, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  221 bits (562), Expect = 1e-62
 Identities = 116/249 (46%), Positives = 159/249 (63%), Gaps = 8/249 (3%)

Query: 7   LLAAVSIAAISLLSGAALAQDKIVIGTEGAYPPFNNLEADGTLTGFDIDIAKALCEQMKA 66
           LLAA   AA  ++S  A+A +K+ +G E AYPPFNN +A G + GFD DI  ALC +MK 
Sbjct: 8   LLAA---AATLVMSANAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKV 64

Query: 67  ECTFVTNDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKKYYNTPPAIAVPKDSPIK 126
           EC+ VT+DWDGIIPAL AKKFD +++S+SIT ER Q VDF+  YY+       PK+   K
Sbjct: 65  ECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFK 124

Query: 127 S-IDDLKGKSLGAQGSTTHSNYAEKHFPDADVKMYPTADEYKLDIANGRIDAVIDDIVVL 185
           +  + LKGK +G Q +T    Y E ++PD ++K+Y T +   LD+ +GRID ++ D  V 
Sbjct: 125 TDKESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQ 184

Query: 186 SEWLKTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKFTAAIAGIRASGKYQEI 245
            EWLK+  G   +     K +P ++ +  GIAVRKGDT L D    A+A I+A G Y++I
Sbjct: 185 YEWLKSKDGSNFE----FKGEPVMDSDKIGIAVRKGDTKLRDDLNKALAEIKADGTYKKI 240

Query: 246 NKKYFDFDV 254
           N KYF F +
Sbjct: 241 NDKYFPFSI 249