Pairwise Alignments

Query, 311 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 274 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Pseudomonas putida KT2440

 Score =  273 bits (698), Expect = 3e-78
 Identities = 137/256 (53%), Positives = 178/256 (69%)

Query: 42  SVSFNKLRKRLLRNVRQAFEDFGMLNGQKRWLVGLSGGKDSYGLLALLLDLKWRGLLPVE 101
           SV+ NKL+KRL R   +A  D+ M+    + +V LSGGKDSY +L +LL L+    +  E
Sbjct: 5   SVNQNKLQKRLRRLAGEAITDYNMIEDGDKVMVCLSGGKDSYTMLDVLLHLQKVAPITFE 64

Query: 102 LVACNLDQGQPNFPKHVLPEYLAKIGVAHRIEYRDTYSIVKEKVPSGGTYCSLCSRLRRG 161
           +VA N+DQ QP FP+HVLP YL ++GV + I  +DTYS+VKE VP G T CSLCSRLRRG
Sbjct: 65  IVAVNMDQKQPGFPEHVLPAYLKELGVEYHIVEKDTYSVVKELVPEGKTTCSLCSRLRRG 124

Query: 162 NLYRIAREEGCDALLLGHHREDILETFFMNFFHGGRLAGMPAKLLNDEGDLMVMRPLAYC 221
            LY  A E G   + LGHHR+DI+ETFF+N F  G L GMP KL  D+G  +V+RPLAYC
Sbjct: 125 TLYTFADEIGATKMALGHHRDDIVETFFLNMFFNGALKGMPPKLRADDGRNVVIRPLAYC 184

Query: 222 AEEDMAKFAAAMEFPIIPCDLCGSQDGLQRNAMKDMLADIERRMPGRKDVMLRALAHVNP 281
           +E D+  ++    FPIIPC+LCGSQ+ LQR  +KDML + ER+ PGR + + RAL +V P
Sbjct: 185 SERDIQAYSDMKAFPIIPCNLCGSQENLQRQVVKDMLVEWERKHPGRTESIFRALQNVAP 244

Query: 282 SHLLDPKLFDFSALAV 297
           S L D  LFDF++L +
Sbjct: 245 SQLADRNLFDFTSLKI 260