Pairwise Alignments

Query, 359 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  104 bits (259), Expect = 4e-27
 Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 25/342 (7%)

Query: 24  IGIVAPQNGPYELLGQQVRQGAKAAAAKLG---------LDVVEIHESCEDGSGGAIADG 74
           IG+  P  G     G+Q  +GA+AAA K+          + +V+  ++CE     A+A+ 
Sbjct: 31  IGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVLVKGDDACEPKQAVAVANR 90

Query: 75  LVAA-KVSAAIGFLCTETLQGVLPPLKAAAIPAITLSSRAPILMEDSLKYGWPLFRLSPS 133
           LV   KV   +G  C+            A + AIT  S  P + E  L     +FR+   
Sbjct: 91  LVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPGSTNPQVTERGLS---AMFRMCGR 147

Query: 134 DRAESDRIAEIILRDWKGHSIGLVDDGTIYSRELVDRIRASLEENGLKPTFSDTMRPNQE 193
           D  +     + I+   KG  + ++ D   Y + L D  +A LE+ G+KP   + +   ++
Sbjct: 148 DDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLEKRGVKPVLYEGLTRGEK 207

Query: 194 QQVALVRRLARTGISHVFVGAERNDVAIIARDAASENLA-LTIMGGDAMNAANNPVPLTA 252
              A+V ++  TG   V+ G    +   + R    + L  +  M  D +    + +  TA
Sbjct: 208 DFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGLKDVKFMSDDGI--VTDELVSTA 265

Query: 253 NVLAVTRPAYDT-------LPSAQAANGELRAAGIEPEGYVLPAYAATE-LTAALAEATQ 304
                    Y T       LP ++A   E R AG EPEGY L AYA+ + L AA   A  
Sbjct: 266 GGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTEPEGYTLYAYASLQALAAAFNGAKS 325

Query: 305 AQSKPAPEILAGGTVFKTVIGDLGFTPSHDLSDNPYRLQRWN 346
            + + A + L    V +TV+G+  +    DL+ + Y + +W+
Sbjct: 326 NKGEDAAKWLKANPV-QTVMGEKKWDSKGDLTVSDYVVYQWD 366